Benincasa hispida (wax gourd): 120081469
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Entry
120081469 CDS
T07258
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120081469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120081469
Spliceosome [BR:
bhj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120081469
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
120081469
NCBI-ProteinID:
XP_038892283
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Position
7:complement(46833606..46837611)
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AA seq
484 aa
AA seq
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MATLADSFLADLDELSDEDNFVAKEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQQT
QRYNDIMQKVEDALRTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
PDEILQKTIDACDRALALDSAKKMVLNFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGLA
ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
TLAARVDSTRGDPTGKTGRAFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
IRKN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctactttggctgattcttttctagcagatcttgatgaactctctgatgaagataat
tttgtggctaaagaagatgctgatgccgaaaatatggaagaggatattgatggggacctt
gccgacctagaaagcctaaattatgatgatctggatagcgtatcaaaattgcagcaaaca
cagagatacaacgatattatgcagaaagtggaagatgcattgcggacagattccaatatc
tcaaatcagggattcgttttggaagatgatcctgagtaccaattgattgtagagtgtaac
gccttgtctgtggatattgagaatgaaattattattattcacaattttatacgtgataaa
tatcgactgaagtttccagagctcgaatcacttgttcaccatccaatcgattatgctcga
gttgttaagaagattgggaatgaaatggatttgactcttgtagatttagaagggctttta
ccctctgctgtcattatggttgtctctgttacagcatctaccacaagtggaaagccactt
ccagatgaaattctccagaaaacaattgatgcatgtgatcgagctcttgctttagattcg
gcaaagaaaatggtccttaattttgttgaaagtagaatgggatttattgcaccaaatctt
tcagcgatagttggaagtgctgttgcagcaaaactaatgggaactgctggtggtcttgct
gctttagctaagatgcctgcttgcaatgttcagcttcttggtgcaaagaaaaaaaatctt
gctgggttttccacagcgacctcacaatttcgagtaggttatattgagcaaacagagata
ttccaatcaacacctcctcctttgaagatgcgtgcttgtcgactcatatctgcaaagtca
acactcgcagcacgggttgactccaccaggggggatcctactgggaagactggtagagcc
ttcaaagatgagatccttaagaaaattgagaagtggcaagaacctccacctgcaaaacaa
ccaaaaccacttccggtccctgattccgaacccaaaaagaagagaggtggccgtcgatta
aggaagatgaaggaaagatatgcaacaacagagatgaggaagctagctaacagaatgcag
tttggggtgcctgaagagagttctttaggtgatggattgggggaagggtatggaatgctt
ggtcaggctgggagtggcaagttacgtgtatctgctgctcaaagcaagcttgctgcaaaa
gttgttaagaagttcaaggaaaaacgctatggaagcagtggtgctacatccgggctgacc
tcaagtttggcatttactcctgtacaaggaattgagctgtcaaatcctcaggcccatttg
aaccagctaggcagtggaacccaaagcacctacttctccgaaacaggaacattttcaaag
attaggaaaaactga
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