Benincasa hispida (wax gourd): 120081549
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Entry
120081549 CDS
T07258
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120081549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bhj01009
]
120081549
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120081549
03036 Chromosome and associated proteins [BR:
bhj03036
]
120081549
Protein phosphatases and associated proteins [BR:
bhj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120081549
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120081549
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120081549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
Adaptin_N
TOR1L1_N
Cnd1
TAF6_C
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
120081549
NCBI-ProteinID:
XP_038892456
LinkDB
All DBs
Position
7:41003952..41021747
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPEMLKTELRSIYGQLCQDDMPMVR
RSAATNLGKFAATIEPAHLKTDIMTIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVL
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDMINNPHYLYRMTVLRAVSLLAPVMGSEITCTKLLPVVISSSKDRVPNIKFNVAKVLQS
LIPIVDQPVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgacgagccgctatatccgatagctgttcttattgatgagctgaagaat
gacgacattcagctacggttgaactccattcggagactttccacaattgcccgtgctctt
ggagaggagcgaactcgtaaagaattgatcccatttctgagtgaaaacaatgatgacgat
gatgaggtgcttcttgcaatggccgaggagttgggagtgttcatcccttatgttggtgga
gttgagcatgcccacgttttgcttccacctttagaaactctgtgcactgttgaggaaaca
tgcgtgagagacaaagctgtggagtcattgtgtagaattggatcccagatgagagagagt
gatttagttgattggttcattcctctcgttaagagattggcagctggtgaatggtttaca
gctagagtatctgcatgtgggctatttcatattgcctaccccagtgctccagagatgttg
aagactgagttacggtcaatatatggccaattatgtcaagatgacatgcccatggttagg
aggtctgctgcaacaaatctaggaaagtttgcagcgacaattgaacctgctcatctgaag
actgatatcatgacaatatttgaggatcttacacaagatgatcaagattctgtaaggttg
ctggccgttgagggttgtgctgccttgggcaagttattggaacctcaagattgtgtttta
catattcttccagttattgttaacttctctcaggataagtcttggcgtgtgcgttacatg
gttgcaaaccagttatacgagttgtgtgaagctgtaggacctgaacctactaggacggat
ttggtacctgcttatgtgcgcttgcttcgagacaatgaagctgaagttcgtattgcagct
gctggcaaagtgactaagttttgtcggattttgagtccagagctggcaattcagcatatt
cttccctgcgtgaaggaattgtcatcagattcctctcagcatgtccgttcagctttagcc
tcagttatcatgggtatggctcctgtgttgggaaaggatgctactattgaacagctgctt
ccaatattcctttctctgcttaaggatgaatttcctgatgtgcgcctcaatatcattagc
aagcttgatcaagtaaatcaggttattggaatcgatctcttgtctcaatcactgttacct
gccatagttgaacttgctgaggataggcattggagggttaggttagcaattatagagtat
attcctttactggcaagtcagctgggtgtagggttttttgacgataagcttggcgctctt
tgcatgcagtggttacaggacaaggtttactcaatccgtgatgcagctgctaataatttg
aagcgtcttgctgaagagtttggtcctgagtgggcaatgcagcatattgtcccacaggtt
cttgacatgattaacaacccacactatttgtatcgaatgaccgttcttcgtgccgtctcc
cttcttgccccagttatgggctcagaaatcacatgcacaaagcttttacctgtggttatc
agttcttccaaggacagggttcccaatatcaagtttaatgtggcgaaggtgttgcagtct
ctcattcccatagttgaccaacctgtggtggaaaaaactatccgtcctagcctagttgaa
ctcagtgaggatccagatgtagatgtccggttctttgccaaccaagctcttcaatcaatt
gatcatgtgatgatgtctagctaa
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