Benincasa hispida (wax gourd): 120081704
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Entry
120081704 CDS
T07258
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03420
Nucleotide excision repair
bhj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120081704
09124 Replication and repair
03420 Nucleotide excision repair
120081704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bhj03051
]
120081704
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120081704
Proteasome [BR:
bhj03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120081704
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120081704
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
UBA_RAD5A
TECR_N
Dsc3_N
CUE
UBA_3
Ubiquitin_4
Ubiquitin_2
MmeI_C
Crinkler
Motif
Other DBs
NCBI-GeneID:
120081704
NCBI-ProteinID:
XP_038892724
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Position
7:40803739..40811114
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AA seq
405 aa
AA seq
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MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE
ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVAKAPQSTAPAPAATPVSTSEVPLPTSA
LPAAVTDSSPPAPASAAAAAAAPAPAPAPAATVLPESDVYSQAASNLVAGSNLEETIQQI
LDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPSTVQATNPSAQSA
QSAQPASVPSTGPNANPLDLFPQGVPNIASGAVGSGSLDFLRNSPQFQALRAMVRANPQI
LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEERE
AIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtcaagactctcaagggctcgcacttcgaaatcgaagttcagcctgca
gatacggttgctgatgtgaagaaaaacatagaaactgttcagggtgctgatgtttaccct
gctgcacagcagatgcttatccatcaagggaaggtccttaaagatagctcaacactggaa
gaaaataaagttgcagaaaatagttttattgtaataatgttaacaaagaataaaagttca
tcgggtgggacatcttctaccacacaagctgcgccagtagcaaaggcaccacagagcact
gcccctgcacctgctgccactccagtgtcaacttctgaagttcctcttccaacttcagca
ttgcctgctgctgttactgattcttctcctcctgctcccgcgtcggctgcggctgcagct
gcagctccagctccagctccagctcctgcagccactgttttgccagaatctgatgtctac
agccaagcagcttctaacctggttgctggtagtaacttggaggagactatccaacagata
cttgacatgggcgaaggtgtttgggatagggacactgttgttcgagctcttcgtgctgct
tacaataatccagaaagggctgttgattacctttattctggaatacctgaacaagttgaa
gccccacctgctcgagttccgtctaccgtgcaggcaaccaacccttctgctcaatctgca
cagtcagcccaacctgcatctgtgccatcaactggcccaaatgctaatccattagatctc
tttcctcagggtgtgcctaatatagcttcaggagctgttggttccggcagtcttgatttt
ctacgaaatagtcctcagttccaagctttgcgagcaatggtgcgagctaaccctcagata
ctccagcctatgcttcaagagttgggtaaacaaaatcctcagctgattaggcttattcaa
gatcatcaacctgacttcctccgcttgatcaatgagccccttgaaggagaagggaatata
ctcgggcaacttgctgaggctatgccgcaggctataactgtaactccagaggagcgtgaa
gccattcaacggcttgaggatatgggtttcgacagaggtctagtcgtggaggttttcttc
gcctgcaacaaaaacgaggaaatggctgccaactaccttttagatcatatccacgaattt
gagggtaatcagaactag
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