KEGG   Benincasa hispida (wax gourd): 120081704
Entry
120081704         CDS       T07258                                 
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03420  Nucleotide excision repair
bhj04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120081704
  09124 Replication and repair
   03420 Nucleotide excision repair
    120081704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:bhj03051]
    120081704
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120081704
Proteasome [BR:bhj03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    120081704
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      120081704
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 Rad60-SLD_2 UBA_RAD5A TECR_N Dsc3_N CUE UBA_3 Ubiquitin_4 Ubiquitin_2 MmeI_C Crinkler
Other DBs
NCBI-GeneID: 120081704
NCBI-ProteinID: XP_038892724
LinkDB
Position
7:40803739..40811114
AA seq 405 aa
MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE
ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVAKAPQSTAPAPAATPVSTSEVPLPTSA
LPAAVTDSSPPAPASAAAAAAAPAPAPAPAATVLPESDVYSQAASNLVAGSNLEETIQQI
LDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPSTVQATNPSAQSA
QSAQPASVPSTGPNANPLDLFPQGVPNIASGAVGSGSLDFLRNSPQFQALRAMVRANPQI
LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEERE
AIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgaagatttttgtcaagactctcaagggctcgcacttcgaaatcgaagttcagcctgca
gatacggttgctgatgtgaagaaaaacatagaaactgttcagggtgctgatgtttaccct
gctgcacagcagatgcttatccatcaagggaaggtccttaaagatagctcaacactggaa
gaaaataaagttgcagaaaatagttttattgtaataatgttaacaaagaataaaagttca
tcgggtgggacatcttctaccacacaagctgcgccagtagcaaaggcaccacagagcact
gcccctgcacctgctgccactccagtgtcaacttctgaagttcctcttccaacttcagca
ttgcctgctgctgttactgattcttctcctcctgctcccgcgtcggctgcggctgcagct
gcagctccagctccagctccagctcctgcagccactgttttgccagaatctgatgtctac
agccaagcagcttctaacctggttgctggtagtaacttggaggagactatccaacagata
cttgacatgggcgaaggtgtttgggatagggacactgttgttcgagctcttcgtgctgct
tacaataatccagaaagggctgttgattacctttattctggaatacctgaacaagttgaa
gccccacctgctcgagttccgtctaccgtgcaggcaaccaacccttctgctcaatctgca
cagtcagcccaacctgcatctgtgccatcaactggcccaaatgctaatccattagatctc
tttcctcagggtgtgcctaatatagcttcaggagctgttggttccggcagtcttgatttt
ctacgaaatagtcctcagttccaagctttgcgagcaatggtgcgagctaaccctcagata
ctccagcctatgcttcaagagttgggtaaacaaaatcctcagctgattaggcttattcaa
gatcatcaacctgacttcctccgcttgatcaatgagccccttgaaggagaagggaatata
ctcgggcaacttgctgaggctatgccgcaggctataactgtaactccagaggagcgtgaa
gccattcaacggcttgaggatatgggtttcgacagaggtctagtcgtggaggttttcttc
gcctgcaacaaaaacgaggaaatggctgccaactaccttttagatcatatccacgaattt
gagggtaatcagaactag

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