Benincasa hispida (wax gourd): 120081987
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Entry
120081987 CDS
T07258
Name
(RefSeq) probable pectate lyase 18 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120081987
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120081987
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120081987
NCBI-ProteinID:
XP_038893100
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Position
7:28247064..28254399
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AA seq
503 aa
AA seq
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MFPVLAILFVWMSASIFGFASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRKMLSIES
KDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDP
ANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCITIQ
YVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
CRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAG
WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNTGQ
GIVYPGFNGENGGNGDEGYGGNTVINNSPIYENGGANGNDDYYGMIFKANGHRVLPLLPS
INLCTQIIILLYIVTNYSGLFTI
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgttcttgccattctcttcgtatggatgtctgcttcaatctttggtttcgct
tctggttctttcaatcttacattaccccatcagcatcctgaccctgattctgttgctgat
gaacttcaaagaacagtgaatgcatctgtatggagaagaaaaatgctgtccatcgaatca
aaggatcaaactttctcttgtctcaccggaaaccccatagacgattgctggcggtgcgat
ccgaattgggcggcgaaccggcagcgactggccgactgcggtattgggttcgggcgcgac
gccatgggcggcaaaggtggcaagatctacatcgttacggactcgtctgatttggatccg
gcgaaccctactccgggcactctccggcacgctgtgatccaattcgaaccactgtggatc
atcttctctgccgacatgactatcaggctgaaatatgaacttatcattaacagtttcaaa
acgatcgacggccgtggcgccaacgtccacatcaccggcggcggatgcatcaccattcaa
tacgtgtctaatgtcatcatccacaacgtccacgtgcaccactgtaaaccctccggcaat
gccaacataagatcgaccccaactcacgtgggccatcgagggttgtcagacggagatggg
atatcaatattcagctcaagaaagatatggattgatcattgttcattgtcatactgcacg
gatggactaatagacgcaataatgggatcgacaggaataacaatatcaaacagctacttc
tcgcaccatgacgaggtgatgttattggggcatgatgatcggtacgtacaagactcgggg
atgcaagtcaccattgccttcaaccacttcggtgaagcattggtccaacgcatgccccgt
tgtagacatggctacattcatgtcgtcaacaatgatttcactgcttgggaaatgtatgcc
attggaggcagtgctcaacccactattaatagtcagggtaatcgttacaccgctcccgta
gaccctaatgccaaagaggtgacaagacgtttagacgcggcggagacggagtgggcaggg
tggaattggcggacagatggcgatattttggtgaacggcgcgttttttgtaccttccggt
gccggacttagcacccagtacggtaaggcttccagcgtggagcctaagtccgtggctctc
atcaatcaactcactatgaacgccggcgttttgggcgcccccaggtataatactggtcaa
ggaattgtatatccaggatttaatggtgagaatggtggaaatggtgatgagggatatggg
ggtaatactgtcataaataatagtccaatttatgaaaatggtggtgctaatggtaatgat
gactactacggaatgatatttaaagctaatggtcatagagtattaccattattgccctcc
ataaacttatgtactcaaattataatacttttgtatatagtcacaaattatagtggtcta
ttcacaatatag
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