Benincasa hispida (wax gourd): 120082014
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Entry
120082014 CDS
T07258
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhj03032
]
120082014
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120082014
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120082014
DNA replication proteins [BR:
bhj03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
120082014
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
120082014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P22_AR_N
Motif
Other DBs
NCBI-GeneID:
120082014
NCBI-ProteinID:
XP_038893149
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Position
7:50846645..50858511
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AA seq
951 aa
AA seq
DB search
MDSDSDSDSDASHVSATPPRASNPPSSSFTPFTSSSKPNRNFTKASSLPRTASSKPLKSS
SRVAKPPPSPDAKPSEKESSPDWTPLPTLPFQIRRASDQSRAISSSESLEMLPAGFFSKS
PSFMKFRRSSLNFETFEDNRTLSEPIQPNNAETEIAGCSTAGWGIKDEFISPRNPVKPVR
KHPNLIGAQVSVPPIKVRKCGGEGNFVKLNMNGRKRKFVKKFTRRKYGERNSYRPHRKTK
TNLKTEDCDEAASFCDEDGLVTETTQHPQKQGNGGAKFDPITIEETISNVRNDPSEDNLV
QLLKLAYGYNSFQDGQLEAIKMVLAGKSTMVVLPTGAGKSICYQIPAMILPGITVVVSPL
VALMIDQIKQLPPVIQGGFLCSSQRPEEVAETVRLLIQGTMKVLFVSPERFQNTDFLSIF
SSSLVVSLLVVDEAHCISEWSHNFRPSYMRLRASLLRAELNVNCILAMTATATTSTMQAI
MTALEIPPDNLILRTTVRTNLQLSVSMSTNRVKDLLRLIKSSPITEVQSIIIYCKFQAET
DLVSRYLCDNGISAKSYHSGLLAKDRKRIQENFCSNKIRVVVATVAFGMGLDKRDVGAVI
HYSMPESLEEYVQEIGRAGRDGRLSYCHLFLDNDTYFKLRSLMHSDGVDEYNINKFLSEV
FSNNNSSCEKVYSIVKEPASRKFDMKDEVMITILTYLELGETPYLRLLSQLNVTCTLNFH
KTSPAMLADKDIIVAEILKKSETKQGQHVFDMLTVVNSIGISATSLSNHLQNLKLKGEVT
YEMKDLAYCYTILKNPEDFCSLSAHLRKWLSEIQTSKVRKLDAMFDAVTSAMNLCGKKTQ
GCCNFEQTPFLEEKICSYFQEGDTCDIPNKMNQSSPFLRADIKVFLQSNSQAKFTPRAVA
RIMHGIGSPAYPSTIWSRTHFWGRYTHINFQAVMEAAMIELVNIVGKDTAS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggattccgattcagactcagattcagatgcttctcacgtctccgccactcctcccaga
gcttcaaacccgccgtcgtcttcatttactcccttcacttcatcctctaaacctaatcgt
aacttcaccaaagcctcttcactcccacgtacggccagttcgaaacccctaaaatcctcc
tccagagttgctaaaccacctccatcacctgatgcgaagccttccgagaaagaatcgtct
cccgattggactccccttccgactctgccgtttcaaatccgacgggcgtctgatcagagt
cgcgcaatttcgtcctccgaatcattggagatgcttccagctggcttcttctcaaaatct
ccttccttcatgaaattccgtcgatccagtcttaattttgagactttcgaggataatcgg
actttgtcggagccgattcagccgaacaatgctgaaactgaaatcgctggttgttcaact
gctggttgggggataaaagatgaatttataagtccccggaatccagtgaaacctgttagg
aaacatcctaacttgattggagcccaagtttctgttccgccgatcaaagtgcgcaaatgt
ggaggtgaaggcaactttgtgaaacttaacatgaatggtaggaaacggaaatttgttaag
aaattcacccggagaaagtatggcgagcggaatagttaccggccccatcgaaagactaag
acgaacctaaaaactgaagattgtgacgaggcggctagtttctgcgatgaggatggtttg
gttacggaaacaacgcaacatcctcagaagcagggcaatggaggtgcgaaatttgatccg
attaccattgaagagactatatccaatgtgcgaaatgatccatctgaggataacttggtg
cagttgttgaagttagcttatggatacaattctttccaagatgggcagttagaggcgatc
aaaatggtgctggccgggaaatcaacgatggtcgttttgcccaccggtgctggtaaatca
atttgttatcaaataccggcaatgattctacctgggataaccgttgttgttagtcctttg
gtggcattaatgatagatcagataaaacaattgccacctgtaattcagggtggcttctta
tgcagcagtcagagacctgaagaagtagctgaaacagtgaggctgctcatccaagggacg
atgaaggtgctctttgtttcacctgaaaggtttcagaacacagattttctgtcaatattc
tctagcagcttagtggtatcgcttcttgtggtggatgaagctcactgcatatctgaatgg
tctcacaactttcgaccttcatatatgaggcttagagcatctttacttcgagctgaactc
aatgttaactgcattcttgcaatgactgcaacggcaactacttcaactatgcaagcaatt
atgactgcattagaaattcctccagacaatctcattctaagaactacagtaaggacaaat
ctacaattgtcagtatcaatgagtacaaacagagtaaaagatctactgaggctaatcaag
tcttctcccataactgaagttcagagcattattatctactgcaagtttcaggcagaaact
gatttggtaagcagatacttgtgtgataatggcatctccgcaaagagttatcacagtggt
cttcttgctaaagatcgcaaacgcatacaagagaatttttgttcaaacaagattagagtg
gttgttgcaactgtggcttttggcatgggacttgacaagagggacgttggcgctgtaatc
cactatagcatgccggaaagcttggaagagtatgttcaagagatagggcgtgctggccgg
gatggtagattatcctactgtcatctatttcttgacaatgatacatatttcaagcttcga
agtcttatgcacagtgatggagtcgatgaatacaacataaacaaattcctcagtgaagta
ttctctaataacaacagttcgtgtgaaaaagtatattcgatagtcaaagaacctgcatca
cgaaaatttgatatgaaagatgaggtgatgattactattctaacatacttggaactgggg
gaaacgccatatttgcgcctactttctcagttaaatgtgacgtgcactttgaattttcat
aagacttcaccagcgatgcttgctgacaaagatatcattgtggcagaaattttgaagaag
tctgaaactaagcaagggcagcatgtttttgacatgctcacggtggtcaatagtattggg
atttcagctaccagtctctcaaatcatttgcaaaatctcaagttgaagggagaagtaaca
tacgagatgaaggatctggcctactgttatacaattttgaaaaaccctgaagatttttgt
tctctgtcagcgcatcttagaaaatggttgtctgagatccagactagtaaggttaggaaa
ctggatgccatgtttgatgcggtgacttctgctatgaatttgtgtggaaagaagactcaa
ggctgctgtaacttcgagcagacaccatttttagaagaaaagatttgttcttattttcag
gagggtgatacttgtgatattccaaataaaatgaaccagagcagcccattcctccgagca
gatataaaagtctttctgcagagcaactcacaggctaaattcactcctagagccgttgca
aggattatgcatggcattggaagcccagcttatccttccacaatttggtcaagaactcat
ttttggggtaggtatacgcatatcaatttccaggcagtaatggaagcagcgatgattgag
ctcgtgaacattgtcggaaaggacactgcatcctag
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