Benincasa hispida (wax gourd): 120082062
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Entry
120082062 CDS
T07258
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03010
Ribosome
bhj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120082062
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120082062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bhj03011
]
120082062
04121 Ubiquitin system [BR:
bhj04121
]
120082062
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120082062
Ribosome [BR:
bhj03011
]
Ribosomal proteins
Eukaryotes
Small subunit
120082062
Archaea
120082062
Ubiquitin system [BR:
bhj04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120082062
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120082062
Exosomal proteins of colorectal cancer cells
120082062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
DUF2604
UBL_UBAC1
TBK1_ULD
Thioredox_PDIA6_C
OTU1_UBXL
Fer2_3
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
120082062
NCBI-ProteinID:
XP_038893211
LinkDB
All DBs
Position
7:complement(47985261..47985946)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaactctaacgggtaagaccatcactctcgaagtcgagagctcc
gacaccatcgacaatgtcaaggccaagatccaggacaaggagggaatccccccggaccag
cagcgtttgattttcgccggaaagcagcttgaggacggccgaacccttgccgactacaac
atccagaaggaatccactctccaccttgtgcttcgtctcaggggaggcgccaagaagcgt
aagaagaagacctacaccaaacctaagaagatcaagcacaagcataagaaggtcaagctc
gccgtcctccagttctacaaggtcgatgactctggaaaggtgcagaggcttaggaaggag
tgccctaacgccgagtgcggcgctggaacttttatggccaaccactttgaccgccactac
tgcgggaaatgtggattgacctacgtttacaacaaagctggtggtgattag
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integrated database retrieval system
