Benincasa hispida (wax gourd): 120082198
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Entry
120082198 CDS
T07258
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120082198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120082198
Spliceosome [BR:
bhj03041
]
Complex A
U1 snRNP components
U1 related factors
120082198
Complex B
120082198
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
120082198
NCBI-ProteinID:
XP_038893392
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All DBs
Position
7:complement(47582100..47588734)
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AA seq
970 aa
AA seq
DB search
MADSSSSPATLDSNPQAAEPENPNSQANKPESAASSFPPPQSLPPTSLSIGINPTLHPPL
VSTPQPHPSLSYAPSPLSGTVAVPPTAPSFRPVPLPAHHFSPMPGSGMLNPSYSNPGVQP
PGVSSVAAPAPGMASGGTVAVPVPVPQPRMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA
TPQGAFPLPGVPRFPSPYPAMIRTPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVR
PAVLPSVTPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF
CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQISET
KEEEADTTNVAKNETSKPSAEDSKEDNDSGEKDLDIACSAVLSDEDRDADREATEKLTNA
LEERLKSRPLPPPPLLTTADVSGNSSAEPSAKLKDGEADGNTLKPDAADDRNDEDTTSDH
KQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQR
RKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRK
WRRGALEEKRKKRSREKEDDSFDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLPGQTMSV
IEKTVLAEESANEVKVMASERESEPDSSCDNHIGDGILQNGSGDELNTIPSETRQSGGLP
AKRLGFGLVGSGKRTAVRSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGSLP
PNLAAAAEFAKRLSTVNSKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTTDRD
RERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWISK
KITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKV
ETGLAFRTKA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcttcctcttcccctgcgactctcgattcaaatcctcaagctgccgagccc
gaaaaccccaattcccaggccaacaaacccgaatctgccgcttcttcttttcctccaccg
caatctttaccaccaacatcgctttctatcggaataaaccctaccttgcatccgccctta
gtgtcaacgccgcaaccacatccttctctatcttatgccccctcacccttatccggtacg
gtggccgttcctccgacggcaccgtctttccggccggtgcctctccctgctcatcacttc
tcgcccatgcccggctctggcatgctgaacccaagctattcaaaccctggggttcagccg
ccgggggttagctcggttgcggcgcctgctcctggaatggcaagtggcggcacggtagca
gttccagttccagtgccacaaccgaggatggcttatcaagttccaccgggtcaggttccg
aatccggtgatgaggccgtacgccactatgccaaatggtttcgcagctgtgccaactgct
actcctcaaggggcctttcctctccctggagttccacgtttcccttctccatatcctgct
atgattagaacgccttttcctccacggccacctggtgctatgggcatggttccagcaatg
ccacgacctcctattcctgggattcctggtgttcgtccaatcatccctcctgtggttagg
cctgctgttctcccaagtgttacaccagctgaaaaaccacaaactactatttatattggc
cgaattgcacaatcggtggataatgatttcatgctgtcccttcttcagctatgtggacca
gtgaagagctggaaacgggcccaagatccttcggatggaactcctagaacctttggattt
tgcgagtttgagtctgctgaaggtgttcttcgtgcgctacgattactgacaaagttaaac
attgatggacaagaactagtgctaaagggtactcaagcaacaagagattatctaaagcgt
tatgttgagaagaaagcagagaattcgaagaaactgaaagagacccaaatttcagagact
aaggaagaagaagcagacacaacaaatgtggctaaaaatgaaacttcaaagccctctgca
gaggattcaaaggaagataatgattcaggggaaaaagatcttgacattgcctgttctgca
gttttaagcgatgaagatagagatgcagatcgcgaggcaacggaaaagcttacaaatgca
ttggaggagaggttgaagtccagacctctgccaccaccccctcttctaacaactgctgat
gtctctggtaattcaagtgcggaaccatctgctaaactgaaagatggtgaagctgacggc
aataccttgaaacctgatgcagctgatgatagaaatgatgaggacacaactagtgaccat
aaacaaactagtgagcatgacaagcctgaaacaagctcacccgacagaagtagaaggtat
gacaggagaagtcgagaaagagacagggagagggatctgaaaagggataaggagcgggaa
attgagagatatgaaagagagacagagcgggagcgagctaggaaagagagggaacaaaga
agaaagtttgaggaggccgagcgacagtatgaagaatgtctcaaagaatgggaatatcga
gaaagagagagagaaaaacagaggcagtatgagaaggagagggagaaagagaaagagcgt
aaaagaaagaaagagatattgtatgatgaagatgacgaggatgatgattcaagaagaaaa
tggcgcagaggcgctctggaggaaaagaggaagaagaggtctagagaaaaggaagatgat
tcatttgatagacagaaagaggaagaagaaattgctgaggccaagaggaaggctgaggag
gaacagctgcagaaacagaaagatccactgaaacttctacctggtcagacgatgagtgtc
atcgagaaaactgttcttgctgaagaatccgccaatgaggtcaaagttatggcttctgaa
cgtgaatctgagcctgactctagctgtgataatcatataggggatgggatcttacaaaat
ggtagtggtgatgaattaaatacgataccatcagagactcgacagagtggaggcctgcct
gccaaaaggttaggatttggtttagtgggatctggaaaacggactgctgtacgttcagtt
tttcatgaggaggaggacgatgaagcacagaaagagaagaagatgaggccgctggttcca
attgattactcagctgaggaactccaggctgtgcaacctgccagtactgggtctctgccg
ccaaatttagctgcagcagctgagtttgcaaaacgtttatctactgttaattccaaagaa
gagaagcctgatggtgaaagggagcggggaaggcgttccagtgaaaagtcaggtcataga
gaccgaaatgatgaggatacctatcgcagcaaagatgagaacaagacaacagacagagat
agggagcgagatcatgttttggataaagtaaaaacaccggataacaaaaagcttttggat
gcaaagcagttgattgatatgattccaaagacgaaagaggaattattctcatatgatata
aattgggctatttacgaaaagcatgcattacatgagagaatgagaccgtggatttcaaaa
aagataacagagtttttgggggaggaggaaacaactcttgtggattacatagtttcaagc
actcaggaacacgtaaaggcatctcagatgctggaattgcttcagtcaattttggatgaa
gaagctgaaatgtttgttctgaagatgtggagaatgctcatcttcgaaataaaaaaggta
gagactggtctagctttcagaacaaaagcatga
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