Benincasa hispida (wax gourd): 120082513
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Entry
120082513 CDS
T07258
Name
(RefSeq) endonuclease MutS2 isoform X1
KO
K07456
DNA mismatch repair protein MutS2
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120082513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120082513
DNA repair and recombination proteins [BR:
bhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120082513
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Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
OmpH
CCDC90-like
GAP45
DUF7605
vRNAP_dom
Motif
Other DBs
NCBI-GeneID:
120082513
NCBI-ProteinID:
XP_038893644
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Position
8:44854978..44859630
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AA seq
912 aa
AA seq
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MEISYSFVAIRKAPCSFPRVLRPVFSLSSTHESVSVRIATSQALQNETLRVLEWSSICRQ
LSTFTSTSMGFDVAQKANVRFGRTREESQKLLDQTTAAEAVVSIQLDFSGIEDVSGILNS
ASSGKLLTIAELCSVRRTLKAARELFEKLQALAVGGHSSDRFMPLLAILQNCDFLVELER
KIEFCIDCNYSIILDRASEDLELIRLEKKRNMEELDSLLKEVSFKIYQARGIDRPLITKR
RSRMCVAVRATHKNLVSDGILLSASNSGATYFMEPKNAVDLNNMEVRLSNSEKAEEIAIL
GMLSTEISESEIHIRYLLDRILELDLALARAAYARWMSGVCPCFSAKGYEGLNSSITDNT
LSVDIDAIQNPLLLSYSLTSSSDNALSYSANVGQFDKRDNVIVSEGFLGSVTDFPIPIDI
KIKRQTRVVVISGPNTGGKTASIKTLGLASLMAKAGMYLPAKNQPKLPWFDLVLADIGDH
QSLEQNLSTFSGHISRLCKILEVSSDESLVLIDEIGSGTDPSEGVALSTSILQYLKNCVN
LAIVTTHYADLTRIKDSDSSFENAAVEFSLETLKPTYKILWGNTGNSNALTIAEAIGFDP
AIIERAKKWMVNLTPETQDERKGLLFKSLIEERDKLEAQRQKAASLHAEISALYKEIQEE
AKDLDKREQALMALETRRAQQETAAIKSKIETVVQEFEEQLKIAGTNQLSSLIKKAESAI
ASICEACSPTNDSRLNVANANSYTPQLGEQVFVTGLGNKLATVVEASDGEETILVQYGKI
KVRVKKSSVKALPNSEKKAAASTLPYSKRQGRQGRESVSGSDGGKDGDSYGPVVQTSKNT
VDLRGMRVEEASYHLDMAISSRGPNSVLFIIHGMGTGAVKEHVVKTLRNHPRVAKYDQES
PMNYGCTVAFIK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcagctacagcttcgtcgccattagaaaagcaccttgcagctttcctagagtt
ctcaggcccgttttctcactctccagcactcatgaatcggtgtccgttcgaatcgctact
tcacaggccctccagaatgaaacccttagggtcttagaatggagttctatctgtaggcaa
ctctccacgtttacgtccacctctatgggctttgacgttgctcagaaggctaacgtccgc
ttcggccggacgagagaggagagccaaaagcttctggatcagacgaccgcagctgaagct
gtggtttccatacagttggatttttctggaatagaagatgtctctggaattttgaattcc
gcgagttctggcaaattgcttactatagctgaactgtgttcggtgcggcgtactctgaaa
gctgctagggagttgtttgagaaactgcaggccctggctgttggtggccattcttcagat
aggttcatgcccttgcttgcaatacttcagaattgcgatttcctggtggaattggagagg
aaaattgaattttgtatcgattgcaattactcaattattcttgatagagccagtgaagac
ttagagctcattcgcttggagaagaagagaaatatggaagagttagattctctgttaaag
gaagtgtcctttaagatttatcaggctcgtgggattgatcggcctcttataacaaagcgc
cgatctagaatgtgtgttgctgttagagctactcacaaaaatttggtttcagatggtatt
ctcttgagcgccagcaattctggtgctacatactttatggaacccaaaaatgcagtggat
ttaaacaacatggaagttaggctttcaaattctgagaaggctgaggaaatagccattttg
ggtatgctttcaactgaaatatcagagtcagaaattcatataagatatttgttggataga
attcttgaacttgatcttgctttggccagggctgcatatgctcgatggatgagtggggtt
tgtccatgtttctcagccaaggggtatgaaggcttaaattctagtataactgacaataca
ttatccgtagatattgatgctattcagaacccattgctgctcagctactctcttacaagt
tcctcagacaatgctttatcttactctgcaaatgtaggtcaattcgacaagagggataat
gtgatcgttagtgaaggttttttaggaagtgtcactgatttcccaataccaatagacatt
aaaattaagcgtcaaactagagtggtcgtgatttcagggcctaatacaggaggtaaaact
gcatccattaagactctgggcctagcatctcttatggctaaggctggcatgtacttgcct
gctaagaaccaaccaaaacttccatggtttgatcttgttctggctgacattggagatcac
cagtctctagagcaaaacctctcaacttttagtgggcacatctcacggctctgtaaaata
ttagaagtatcctcggatgaatccctagtccttattgatgaaattggcagtggaactgat
ccctcagaaggcgtggctctctctaccagcattttgcaatatctcaaaaattgtgttaac
ctagctattgtgactactcattatgcagatttgactcgcataaaagatagtgactcttcg
tttgagaatgcagctgtggaattttcgctagaaactttaaaacctacctataagatcctt
tgggggaatactggaaattcaaatgctttaaccattgctgaagctattggatttgatcct
gctataatagaacgtgcaaagaaatggatggtgaatcttacaccagaaacgcaggatgaa
cgcaaaggtttgctctttaaatcactaatagaggaaagagataaattggaagctcaacga
cagaaagctgcatctcttcatgcagaaatttctgcactttataaagagattcaagaggag
gcaaaagatcttgataagcgtgagcaagctcttatggctcttgaaactagacgagctcag
caagaaactgccgcaataaagtccaagatagaaactgtcgttcaggagttcgaagagcaa
ttgaaaattgctggtactaatcaattaagttcattgattaagaaggcagaatccgctatt
gcctcaatttgtgaagcttgtagtccaaccaatgattcccgcctcaatgttgcaaatgca
aattcttatacaccccagttaggtgaacaagtgtttgtaactggtcttgggaataagtta
gccactgtggttgaagcgtctgatggcgaagaaacgatcctcgtgcaatatggtaaaatt
aaggtcagagtgaagaaaagcagcgtcaaagctcttccaaatagtgagaagaaagctgca
gctagtactcttccatactctaagagacagggtcgacagggtagagaatccgttagtggt
tcagatggaggtaaagatggagattcctatggtcctgttgtgcagacttcgaagaataca
gtcgacttacgtggtatgcgagtagaagaagcttcttaccaccttgatatggctatttct
tcaagaggaccaaattcagttctttttatcatacatggaatgggcacaggggccgttaag
gaacatgtagtcaagaccttgagaaaccatccgcgtgtcgctaagtatgatcaggagagt
ccgatgaactacggttgtacggttgcttttatcaagtag
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