Benincasa hispida (wax gourd): 120082679
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Entry
120082679 CDS
T07258
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120082679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bhj04040
]
120082679
Ion channels [BR:
bhj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120082679
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
DUF3985
Motif
Other DBs
NCBI-GeneID:
120082679
NCBI-ProteinID:
XP_038893876
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Position
8:complement(57161718..57201984)
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AA seq
850 aa
AA seq
DB search
MAAFEKDDIPMLSNTDPPMFDEQADSYFPSYASLGRSSSLSIPATSSGMYGSEANLVAHT
GPLQIGRSSFMVSGSKYTGGKPEKLSQSKPGVTESKTAEPLAEKFPSFKTTDESDWSIHN
YAGRNEHLIRSGQLGLCNDPFCITCPTYNFKASQQKSSRMSGIFDAKFHNDLYGGGKGWA
GKFQSFWCFLLPYIPGVMNPHAKVIQQWNKFFVIACLVAIFLDPLFFFLLSVQEKNKCIV
IDWPLTTTLVVFRSMTDFIYFLHMLLQSQGEHKELDDDFLVYTVISPFDSLPDSSLPVAT
STLPPTLRSILDDNLLQFHALYQSLLRHWIQTRVMIFLLLFVKFRLAYVAPETRVVGAGE
LVDHPKKIAMNYLKGNFFIDLLVVLPLPQIIIFLVLPKSLGSSGANYAKNLLRTAVTVQY
IPRLYRFLPLLAGQSPSGFVFETAWANFVINLLTFMLAGHIVGSFWYLLGLQGVNRCFRK
VCVDTKNLSCLEYIDCGHGDEAGSLIPNSQRDSWINNENASACFAKEGFDYGIYLQAVNL
TTENSIITRYTYSLFWGFQQISTLAGNQVPSYYVYEVLFTMAIIGLGLLLFALLIGNMQN
FLQALGRRRLEMSLRRRDVEQWMEHRRLPHNLRRQVRQAERYNWASTRGVNEERIFENLP
EDLQRNIRRHLFRFVNKVRIFALMDYEPILDAIRERLRQKTYIEGSEVFSAGDIIEKMVF
IVRGKMESRVDGNGIVVPLSEGDVCGEELLTWCLEHSSINKDMKRHQVPAPRLVSNRTVK
CLSNVEAFSLRAADLEEVTSMFSRFLRNPRVQGAIRYESPYWRYLAAMRIQVAWRYRKRR
LSRVQTSQSN
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttgaaaaagacgatataccaatgctatcaaataccgatccaccgatgttt
gatgaacaagcggattcttattttccttcatatgcatccttgggccggagttcgtcacta
tcaattccagcaacttcttctgggatgtatggaagtgaagcaaatcttgttgctcatact
ggtcccctacaaatcggaagaagttcattcatggtgagtggttcaaaatatactggcggc
aagcctgaaaaactttcacagtcaaagccaggagtgactgaaagcaaaacggcagagccg
ttggcagaaaaatttccttccttcaagacgacagatgagtctgattggtccattcataac
tatgctggtagaaacgaacacttaataaggtctggccagctgggattgtgcaatgatcct
ttctgtataacttgtccaacatataatttcaaagcatcacaacagaaaagctcaagaatg
tcaggcatatttgacgccaagtttcataatgatctctacggaggagggaaaggttgggcg
gggaagtttcagtccttctggtgcttcttgcttccatatattcctggagttatgaatcct
catgcaaaagttatacagcaatggaacaagttttttgtcattgcttgcttagtggcaatc
ttcttggacccattatttttcttcttgctgtctgttcaagagaagaataagtgcatcgtt
attgactggcctttgaccacaacattggtggtttttcggagcatgactgattttatctat
ttcctacacatgcttctccagagtcagggggagcataaggaattagatgatgatttcctt
gtctacacagttatttctccattcgattctcttcctgattcatctctacctgtggctacc
tctactcttccacccacgttaaggtctatactcgacgacaacctccttcagttccatgcc
ttgtaccagagtcttcttcgtcattggatccagacacgagtgatgatcttcctattgctt
ttcgtaaagtttaggttggcctacgtggcaccagaaaccagagttgttggtgctggcgaa
ttggttgatcatccaaagaaaattgctatgaattaccttaaaggaaatttttttatagat
ttgcttgttgttttgccgctgcctcagattataatttttcttgtcctgccaaagtctttg
gggtcatctggagcaaattatgccaaaaatctattacgcactgcagttactgttcaatat
attcccagactgtataggtttctacctcttcttgctggccagtctccaagtggctttgtt
tttgagacagcatgggcaaattttgtcatcaatcttctgacctttatgttggctggtcat
atcgttggctctttctggtatctccttgggcttcagggggtgaatcgatgtttccgaaag
gtctgcgttgacactaaaaatctgagctgcttggaatatatagattgtgggcatggggat
gaagctgggagtctgattccaaattcacagagggattcatggataaataatgagaatgct
tcagcatgttttgccaaagaaggttttgattatggaatctaccttcaggctgtaaatctt
actacagaaaatagtataatcacgagatatacttactcattattttggggattccagcaa
atcagtactctggctgggaaccaagtcccaagctattatgtctatgaagtccttttcact
atggctattattgggcttggcctattgctgtttgctcttctcatcgggaacatgcagaac
tttctccaggctcttggaagaaggaggttagaaatgtcactaagacgtcgtgatgttgag
cagtggatggagcatcgtcgcttaccacataatttaagaaggcaagtacgacaggctgaa
agatacaactgggcttctacaaggggcgttaatgaagagaggattttcgaaaatttgcct
gaggacctacaaagaaacataagacgacatctctttagatttgtcaacaaggttcgcatt
tttgcactgatggactatgagcctattttagatgcaatacgtgagagattgcgacaaaag
acatacatagaaggaagtgaggttttttctgcaggagatatcattgagaagatggttttc
atcgtacgggggaaaatggagagccgtgtagatggaaatgggattgtggttcccttatct
gaaggagatgtctgcggtgaggaacttctaacatggtgtcttgagcattcctccataaac
aaagatatgaagcggcatcaagttccagcaccaagattggtcagcaaccggacagtaaaa
tgcttaagtaatgttgaagcgttttctctccgggctgcagacctcgaagaagtgactagt
atgttttccagattcttgcgaaatccacgtgttcaaggagccataaggtacgaatcaccc
tactggaggtacctagcggcaatgcgtattcaagtagcttggagatacagaaaaaggcgt
ctatctcgagttcaaacctctcaatctaactaa
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