Benincasa hispida (wax gourd): 120082930
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Entry
120082930 CDS
T07258
Name
(RefSeq) LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120082930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhj03009
]
120082930
03032 DNA replication proteins [BR:
bhj03032
]
120082930
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
120082930
Prokaryotic type
120082930
DNA replication proteins [BR:
bhj03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
120082930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
120082930
NCBI-ProteinID:
XP_038894282
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All DBs
Position
8:35402653..35409132
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AA seq
635 aa
AA seq
DB search
MSKNRSMSPAVGSDEQPQKDVADFMIKPNSYTPPVDTSQWPILLKNYDRLNVRTGHYTPL
PSGFLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNL
IVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKR
QLRIRTIYESKLLEYDVDKHLVVFWISCEAGTYVRTLCVXLGLILGVGGHMQELRRVRSG
ILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYG
AKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMD
RDTYPRKWGLGHPGHQXRKNLLREGKLDKHGKPNANTPQEWLRNLVLPTGGDSLVASILA
TDTATAKPTTAEETGKDDGGRKRKLDEETEAAPGKKLKAEKAEEVEEEVGKKEKKKKKKK
DKEKGTAEEPSDEENVENSEKKKKKKDKEAKEAKEAGTPETQKSKKKKKKKDNESGNDDS
QLHAADVQNGEADGHVDGSEKKKKKKDKEAKEAKEAGTPETQKSKKKKKKKDNESGNDDS
QLHAADVQNGEADGHVDGSEKKKKKKKKNKEDAEE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaacaggagcatgtcaccggctgtcggttccgacgaacagccgcagaaggat
gttgctgactttatgatcaagcctaacagttatactcctccggtggacacatctcaatgg
cctattcttctgaaaaactatgaccgtcttaatgtacgtactggacactacactcctctg
ccgtctggtttcttgcctctcaaacggcctttggctgagtatatcagatatggtattctc
aatcttgataaaccagcgaatccttcgtcgcacgaagttgtggcttggattaagcggatt
cttcgggttgataaaacgggtcatagtggtactctcgacccgaaggtaactgggaacctg
attgtgtgcattgatcgagccacgcggcttgtgaaatcgcaacagggtgcgggtaaagag
tacgtgtgtgttgctcggttgcattctgctgtgcccgatgtttctaaggttgctcgggct
ctggagacgctcactggggctgtgtttcagaggccgccattgatatctgctgtgaaaagg
cagcttaggattagaactatatatgaaagcaagcttcttgagtatgatgtcgacaaacat
ttggttgtgttttggatttcttgtgaagcgggaacttatgttaggacgttatgtgtcnna
ctgggtttgattcttggcgttggagggcatatgcaggaacttaggagggtgagatctgga
attttgggtgagaaggataacatggttacaatgcatgatgtgatggatgctcaatgggtt
tatgataatttcaaggatgaaagctatctgaggagggtaattatgcctcttgaggtggtt
ttgacgagctataaaagattggttgtcaaggattctgctgttaatgctatttgttatggt
gcgaagttgatgattccagggttgttgagattcgaaaacgatattggagttggggaagaa
gttgtacttatgaccaccaaaggcgaagccattgctcttggtattgcagagatgactact
gcagtgatggcaacttgtgaccatggtgttgttgcaaagatcaaaagggttgtgatggat
cgagatacttacccaaggaagtggggactaggtcatccagggcatcaatgaagaaaaaac
ttattgcgggaagggaagttggacaagcatgggaagccaaatgcgaacactcctcaggaa
tggctgaggaatttggttttacccactggtggggactctttggttgcgagcattctcgct
accgataccgcaactgctaagcctactactgcagaagagacaggaaaagatgacggaggg
cggaagcgaaaactagatgaagaaactgaagctgctccaggtaagaaactgaaggctgaa
aaggctgaagaagttgaagaagaagtcgggaagaaagaaaagaagaagaagaagaagaaa
gacaaagagaagggtactgcagaagaaccttccgatgaggagaatgttgaaaattcagag
aagaaaaagaagaagaaggataaagaagctaaagaagctaaagaagcaggtacacctgag
acacaaaagtccaagaagaaaaagaaaaagaaagataacgagtctggaaatgacgattct
caattacatgctgctgatgttcaaaatggtgaagcagatggtcatgttgatggaagtgag
aagaaaaagaagaagaaggataaagaagctaaagaagctaaagaagcaggtacacctgag
acacaaaagtccaagaagaaaaagaaaaagaaagataacgagtctggaaatgacgattct
caattacatgctgctgatgttcaaaatggtgaagcagatggtcatgttgatggaagtgag
aagaaaaagaagaagaaaaagaagaataaagaagatgcagaagaataa
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