Benincasa hispida (wax gourd): 120082962
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Entry
120082962 CDS
T07258
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00730
Thiamine metabolism
bhj01100
Metabolic pathways
bhj01240
Biosynthesis of cofactors
Module
bhj_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
120082962
Enzymes [BR:
bhj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
120082962
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Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
120082962
NCBI-ProteinID:
XP_038894337
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Position
8:complement(17257846..17262915)
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AA seq
649 aa
AA seq
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MASVHATITPAVGKSGNRSHATKPLNTAFLPGFDVVGRVSGACKDLHPSSITLAPRATLT
FDPPGTSTEKAKSKKHTVDPSSPDFLPLPSFEQCFPKSTKEHKEVVHKETGHVLKVPFRR
VHLSGDEPNFDNYDTSGPQNISPRIGLPKLRKDWVDRREKLGTPRYTQMYYAKHGIITEE
MLFCATREKLDPEFVRSEVARGRAIIPSNKNHLELEPMIVGRNFLVKVNANIGNSAVASS
IEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSSVPVGTVPIYQALEKVNGIAE
NLTWEIFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAHHK
ENFAYEHWDDILDICNLYDISLSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDV
QVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDVAPGYDHITSAIGAANIGAL
GTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPHAQSWDDALSKARFEFR
WMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGS
AEEALQQGMDAMSAEFLAAKKTISGEQHGETGGEIYLPASYVDSQKRCS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagttcatgctaccataacaccagctgttggtaagagtgggaaccgttcccat
gctacgaaaccacttaatactgccttcttgcctgggtttgacgtggttggacgtgtttcc
ggtgcatgcaaggacttacacccttcgtccattacgttagctccgagagccactttaacc
tttgatccccctggaaccagtacggagaaagccaaaagcaagaaacatacagttgatcct
tcatctcctgattttctgccgcttccttcatttgaacaatgtttcccaaaaagcacaaaa
gaacacaaggaagttgttcacaaagaaactgggcatgtactcaaagtaccctttcgtcgg
gttcatttatctggcgatgaaccaaactttgataattatgacactagtggtcctcaaaac
atcagtccccgtattggattgcctaaacttcgaaaggactgggttgataggagggaaaaa
ttaggcacaccaagatacacacagatgtattatgccaagcatggaatcatcactgaggaa
atgttgttttgtgccactcgtgagaagcttgacccggagtttgtgaggtcagaggttgct
cgtgggcgggcaattatcccttccaacaaaaatcatttggagttggagcccatgattgtg
ggcagaaatttcttggtcaaagttaatgcaaatattggaaactctgctgtagcaagttct
attgaagaagaagtttataaagtccaatgggcgaccatgtggggagctgatactgtcatg
gacctctccaccggtcgtcacatacacgagacccgagagtggatattgcggaattcatcg
gtaccagtaggaactgtccccatatatcaggcacttgaaaaagtgaatggaatagctgaa
aacctcacctgggaaattttcagggaaacactgattgaacaagctgagcagggtgttgat
tactttacaattcatgctggggtattacttcgatacatccctctaacagcaaaaagaatg
acaggaattgtatcacgtggaggatccattcatgcaaagtggtgtttggctcatcataag
gaaaattttgcttatgaacattgggatgacatacttgacatctgtaatctgtatgacata
tccctatcaattggtgatgggctgagacctggttcaatttatgatgccaatgacactgcg
caatttgcagagctcttaactcagggcgaactgactcgtagagcatgggaaaaagatgtg
caggtaatgaatgaaggacctggacacatcccaatgcataagatccctgaaaacatgcaa
aaacagcttgagtggtgtaatgaagctcctttttacactcttggtcctttgactacggat
gtagctcctggatatgaccacattacctctgccattggtgctgccaatattggtgctctt
ggcacggcccttctctgttatgttacaccgaaagagcacctaggattgccaaatcgagat
gatgtgaaagctggagttatagcatataagatagctgctcatgcagctgatctagccaaa
ggtcacccacatgctcaatcatgggatgatgcactgagcaaggcgagattcgagttccga
tggatggatcaatttgctttgtcattagaccctatgactgccatgtcctttcatgatgaa
accttgccatcagaaggtgccaaggtggctcacttctgttccatgtgtggacccaagttc
tgctcaatgaagataaccgaggatgtgcggaagtatgctgaagaacacgggtacgggagt
gcagaggaagctctgcagcaagggatggatgctatgagtgctgagttcctggctgcaaag
aaaaccattagtggtgagcaacatggtgaaactggtggagaaatctacttgcctgcaagc
tacgtggactcccagaagagatgctcatga
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