Benincasa hispida (wax gourd): 120083068
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Entry
120083068 CDS
T07258
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120083068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120083068
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120083068
mRNA degradation factors
5'-3' decay
Lsm complex
120083068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Mbeg1-like
Motif
Other DBs
NCBI-GeneID:
120083068
NCBI-ProteinID:
XP_038894529
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Position
1:71885354..71888391
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AA seq
95 aa
AA seq
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MRSFDQFGTIVLESAFERIIVENEYCDNPIGLLVVRAENIILIGEPDPSLPQLPPHMTVV
SLPQILTARKAERESVELQRTLKKWMEELLEDIFD
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcctttgatcaatttgggactattgttcttgaaagtgcttttgaaagaattatt
gttgagaatgagtattgtgataatcccattggtcttttggtagttcgagccgagaatatt
attctaattggagagccggaccccagcttgcctcaacttcctccacatatgactgttgtc
tctctccctcagattctaactgctaggaaagcagaaagggagtcagtagagcttcaaaga
accttgaagaaatggatggaggaactccttgaagatatatttgattga
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