Benincasa hispida (wax gourd): 120083087
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Entry
120083087 CDS
T07258
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120083087
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bhj01002
]
120083087
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120083087
04121 Ubiquitin system [BR:
bhj04121
]
120083087
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120083087
Peptidases and inhibitors [BR:
bhj01002
]
Metallo peptidases
Family M67
120083087
Membrane trafficking [BR:
bhj04131
]
Endosome - Lysosome transport
Others
Others
120083087
Ubiquitin system [BR:
bhj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
120083087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
120083087
NCBI-ProteinID:
XP_038894564
LinkDB
All DBs
Position
8:38315738..38325454
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AA seq
501 aa
AA seq
DB search
MRSSSERINIAASTRRVVVDNRFPLRYYYRVADNVLKQADIFRAEKNIIDLYVMLMRFSS
LVTETIPRHLEYGTTLKSQKNYFRKKLLNALSELEELKPAVQRKVDEINGKQKYQVNGWG
NQHQNGSLEWHSGGKQYLTDNGTAKAGRSASREIALQGSGPQQFSYSRSIRIPLPKEETL
SRHSILGPNGLHGQWQPPIIEKGVQYPRISDLSPLDIPSLQQSIETKLTIEKDVGNLEKE
RSDIDSICIQNNGREINNAMGTDSLISFEKVEMPAPIEIVRQPSPPPVLAEVQDLIPAMS
PQVPEAECAQDTSLSDGFVHPEATMELHISTAMMESFMRLAKSNTSKNLETCGVLAGSLK
NRKFYVTALIVPKQESTPNTCQATNEEEIFDVQDKRSLFPLGWIHTHPSQSCFMSSVDVH
THYSYQVMLPEAVAIVMAPKDSARNHGIFRLTTPGGMSIIRQCQQRGFHSHGQPPDGGPI
YKTCTDIYLDPNLKFDVIDLR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagatcttcttcggagagaatcaacatcgccgccagtacccggcgggtcgttgttgac
aatcgatttcctcttcgttattactatcgagtcgccgataatgttttgaaacaggctgac
atctttcgagcagagaagaacataattgatctttatgtcatgttaatgagattttcaagt
ttggtcactgagacaatacctcgtcatttggagtatgggacaactctgaaatcccaaaaa
aattattttagaaagaagctattaaatgctttgagcgagcttgaagaattgaagccagca
gttcaaagaaaggtggatgaaataaatgggaaacaaaaatatcaagtcaatgggtggggt
aatcagcatcaaaatggttcattagaatggcattctggtggaaagcaatatcttactgat
aatggcacggctaaggctggtagatcagcttcaagagaaattgctcttcaaggttcagga
cctcaacaattttcatattccagatctattcgtattccactcccaaaggaggaaacatta
tcccgtcattctattttgggtcccaatgggcttcacgggcagtggcaaccacctatcatt
gaaaaaggggtccaatatccacgtatttcagatctgtctccccttgacattccaagctta
caacaatcaatagaaaccaaacttacaatagaaaaagatgttggaaacttggaaaaagaa
agatctgatatagactcaatctgcatccagaataatggtcgcgagataaataatgcaatg
ggaacagattccttgatctcgtttgaaaaagttgaaatgcctgcccctattgaaattgtg
cgacagccttctcctccacctgtacttgctgaagtacaggatttgattcctgcaatgtca
cctcaagttcctgaggcagaatgtgcacaagacacttcattgtcagatggttttgttcat
ccagaagctactatggaattgcacatttcgaccgcgatgatggagagcttcatgaggcta
gccaagtcaaatacttccaagaatttagaaacctgtggtgttcttgccggttcacttaaa
aacagaaaattttatgtcactgctctcatcgtaccaaagcaggaatcaacaccaaatact
tgtcaggcaacaaatgaagaagagatatttgacgtgcaggataagcgttctctattccca
cttgggtggattcatacgcatccttcacagtcatgcttcatgtcttcggttgatgttcac
acacattactcatatcaggtaatgttgccagaagctgttgcaattgtgatggctcccaag
gacagtgcaagaaaccatggcattttccggttgacaaccccgggtggcatgtccataatt
cggcaatgccaacaacgtggctttcactcgcacggtcagcctcctgatggcggacccatt
tacaaaacctgtacagatatatacttggaccccaatttgaaatttgatgtcattgatctt
cgatga
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