Benincasa hispida (wax gourd): 120083123
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Entry
120083123 CDS
T07258
Name
(RefSeq) pectate lyase-like isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120083123
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120083123
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120083123
NCBI-ProteinID:
XP_038894609
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Position
8:complement(41879424..41884594)
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AA seq
431 aa
AA seq
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MKKRVFTVPISRCNRLVTVNYGQGPVFALVEEASQSQCLILHFLNGWTLLLENLIPSSHK
KSLDGANNTRRHLRKYNGPCLATNPIDRCWRCDKHWAKNRKKLADCALGFGRGTTGGKNG
RIYVVRDSSDNDLLNPKPGTLRYGVIQDRPLWIIFAHDMVIRLSEELIMTDNKTLDGRGA
NVHIANGGQLTLQFVKNIIIHNLHIHDIKAGNGGIIRDSVNHYGFRTPSDGDGISMFGAS
KVWIDHVSMSNCQDGLIDAVMASTGITISNCHFTRHNDVILLGASDSYSNDQIMQVTLAF
NHFGKGLVQRMPRCRWGFIHVVNNDYTHWLMYAIGGSHNPTIISQGNRFIAPPNPNSKEV
TKRAYASESEWRSWNWRSEGDLMLNGAFFIQSGNPIRRYSKKDVIHSKPGTFVTRLTRFA
GPLKCIKNQPC
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagggtcttcacggtaccaatttctcgctgcaatcgcttagttactgtgaac
tatggccaagggcctgtttttgcccttgtggaagaagcttctcaatcccaatgtcttatt
ctgcactttctgaatgggtggactttgttgctagagaatctgatcccctcatctcataaa
aaatccttagatggtgcaaataacacaaggagacatttgaggaagtacaatggtccatgt
ttagcgacgaatccgattgaccgttgctggagatgcgataaacactgggctaaaaaccgc
aagaagctagctgattgtgcacttggctttggtcgtggaacaactggaggcaaaaatgga
aggatttacgtggttcgagattcaagtgataacgacttgctgaatcctaaaccaggaacc
ctacgctatggcgtgatacaggatagaccactttggattatatttgcacatgacatggtg
attaggctaagtgaggagcttataatgactgataacaagacattagacggtcgcggtgcc
aatgtgcacatcgctaatggtggtcaacttactctacaatttgtgaagaatataatcatc
cataatcttcacattcatgatatcaaggctggcaatggaggcattataagagactcggtg
aaccactatggattccgaacaccgagcgatggcgacggaatctcgatgttcggagcctca
aaggtttggatagaccatgtttcaatgtctaattgtcaagatggactaatagatgcagtc
atggcatctactggcattaccatttccaactgtcacttcacccgccataatgatgtgatt
ttattgggtgcgagtgatagctactcaaatgatcagataatgcaggtaactcttgcattt
aatcactttggtaaagggttggtgcaaaggatgccgagatgccgatgggggttcatccat
gtagtcaataatgactacactcactggcttatgtatgccatcggcggcagccacaacccc
accattatcagccagggaaaccgattcattgccccaccaaacccaaattccaaagaggtg
acgaaaagggcgtatgcatcggaaagtgaatggagatcttggaactggaggtcagaggga
gatctgatgttgaatggagcttttttcatccaatctggtaaccccatcagaagatactcc
aagaaagatgttatccattcaaaacccgggacctttgtcaccaggctaacacgattcgct
ggccctctgaaatgcataaaaaaccagccctgttag
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