Benincasa hispida (wax gourd): 120083168
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Entry
120083168 CDS
T07258
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120083168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120083168
03012 Translation factors [BR:
bhj03012
]
120083168
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120083168
Translation factors [BR:
bhj03012
]
Eukaryotic type
Release factors
120083168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
120083168
NCBI-ProteinID:
XP_038894704
LinkDB
All DBs
Position
8:complement(39006841..39025056)
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AA seq
528 aa
AA seq
DB search
MDIEEDIRALELDPPDVNGVPNPDSKMEEVVKSDNLEEDAKTEEIVKSDQMEEEDRPQQA
QAIHLEGQVKENISAKEKEVPLADENEDEGDLELPRKRHLNVVFIGHVDAGKSTIGGQIL
FLSNQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFT
ILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVAKL
LVVVNKMDEPTVKWSKERYDEIETKMAPFLKSSGYNVKKDVQFLPISGLHGVNMKTRVDK
KVCPWWNGPCFFEILDTIEGPPRNPKDPFRMPIIDKFKDMGTTVMGKVESGTVREGDSLL
VMPNKIQVKVAAVICDENKVRSAGPGENLRVRISGIEEEDIMSGFVLSSIAKPIPSVSEF
VAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIIELLQQIDPKTRKPMKKKVLFVKNGA
VILCRIQVNNLICIEKFSDVPQLGRFTLRTEGKTVAVGKITDISAASN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggaggacattcgtgcactagaacttgatccaccagatgttaatggggtt
cctaatccagattcaaagatggaggaagttgtgaaatccgataatctggaagaagatgca
aagactgaagaaattgtgaagtccgatcagatggaagaagaggaccgtccccaacaagcc
caagctatccaccttgaaggacaagtgaaggagaacatatctgctaaggagaaggaagtt
cctctggctgatgaaaatgaagatgaaggggatttggagttgcctcgcaaaagacacttg
aatgtcgtcttcattggtcatgttgatgctggtaagtctacaattggaggccagatactt
ttcctcagcaaccaggttgatgagcgtacaatccaaaagtatgaaaaagaagcaaaagat
aaaagcagagaaagctggtacatggcgtatataatggacacaaatgaagaggagagagtt
aaggggaaaactgttgaagtgggaagagcgcattttgaaactgagaccacaaggtttacg
attttggatgctccgggtcacaaaagttatgtcccaaatatgatcagtggggcatctcaa
gctgatataggggttctggtaatttctgctaggaaaggagaatttgaaactgggtatgag
agaggtggacagactcgtgagcatgttttgctggcaaaaactttgggtgttgctaagctt
cttgttgtagtgaataagatggatgaacccacagtaaaatggtcgaaagaaaggtatgat
gagatagagactaagatggcacccttcttgaagtcttctggttacaatgtaaagaaagat
gtccagtttttacctatatctggtcttcatggtgttaatatgaaaacaagagtggataag
aaagtatgcccatggtggaatggtccgtgcttctttgaaatccttgatacaattgaaggt
ccacctagaaatccaaaagatccatttaggatgcctatcattgacaagttcaaggatatg
ggaacaactgttatgggtaaagttgaatctggcactgttcgtgagggtgattccttatta
gtaatgccaaataagattcaggtgaaagttgctgctgtgatttgtgatgaaaataaagtt
aggagtgcaggacctggggaaaatcttcgtgttagaatatctggaattgaagaagaagat
ataatgtctgggtttgtactgtccagcattgcaaaaccaataccctctgtttcagagttt
gttgcacagttgcagattcttgagctgctggataatgcaatatttacagctggatataag
gccgtacttcacattcatgctgttgttgaagaatgtgagatcatagagctgctacagcag
attgatccgaagaccaggaaacctatgaaaaagaaagttctctttgtgaagaatggtgca
gttattttgtgccgcatccaggtcaataacttgatctgcatcgagaagttttctgatgtt
cctcagcttgggagatttacacttcgtactgaagggaagacagttgccgtaggaaaaatc
actgatatttcggctgcaagcaattaa
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