Benincasa hispida (wax gourd): 120083200
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Entry
120083200 CDS
T07258
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120083200
Enzymes [BR:
bhj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
120083200
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120083200
Prokaryotic type
120083200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
120083200
NCBI-ProteinID:
XP_038894774
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All DBs
Position
8:complement(15215335..15229583)
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AA seq
505 aa
AA seq
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MAVSSLRLPLSPWITKTSSSCFLFPYPTFVSRTHRLGPTLSGCSASSTASTDAFSTQCAP
NQLRKWEAFRKKKVVLRIGYVGTDYRGLQMQREQQSHPTIEQELEAAIYKAGGIRESNYG
NLNKISWARSSRTDKGVHSLATTIALKMEIPESAWMGDPCGISLANYINFYLPDNIKVFG
IVPSQKSFDPRKECDVRKYSYVLPAKLIGIGNKLKTTEVDYHISDFKDILNSFQGEHPFH
NYTIRSKYRTRIRAKRSPGYGHEVSPSDVSNSEFEESDGEDDTFVEGVKEPDQGSPSLSV
CYENPTEVCSKLGDGSELPKDVRARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDF
VEISIWGESFMLHQIRKMIGTAIAVKRKLLPRDVIALSLSKFSRIVLPIAPAEVLVLRGN
SFSNRKRPGVPKRPDLLTLNESDDIVKSVNEFYRSAILPEVTNFLDTERPPWKEWVEKLD
KYTSIPSEQLDEVRNAWKAWNYRVH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctcttctctgcgactcccgctttccccatggataaccaaaacttcatcttca
tgctttctttttccctaccctactttcgtttcacggacccatcgtcttgggcctacactt
tcgggctgttccgcatcttctactgcgtccactgatgccttttccactcagtgcgctccg
aaccagcttcggaaatgggaagctttccgtaagaagaaggtcgttttgcggattggctat
gttgggaccgattatagagggctgcaaatgcaacgcgagcaacagtcacatccaacaatc
gaacaagaattggaagctgcaatatataaagctggtggaattcgtgaaagtaactatgga
aatctgaacaaaatctcatgggcgaggagtagtcgaactgataaaggagtccattccttg
gctacaactatagccttaaaaatggaaatccctgaaagtgcatggatgggcgacccttgt
ggtatttcgcttgctaattacatcaacttttatcttcctgataatatcaaggtttttggc
attgtaccttcacagaagagctttgatcctagaaaggagtgtgatgttcggaagtattct
tatgtcctccctgctaagcttattggaattggaaataaacttaaaactactgaagttgat
taccacatctcagactttaaagatatattaaattcctttcagggggagcacccttttcat
aactatacaatacgttccaagtatagaacaagaattcgagccaagcgatctccaggatat
ggccatgaggtatcacctagtgatgtctcgaactccgagtttgaggaaagtgatggagaa
gatgatacttttgttgaaggagtcaaggaaccagatcaaggttctccaagcttaagtgtt
tgttatgaaaatccaactgaagtatgcagtaaactcggagatggatcagaacttccgaag
gatgttcgtgcaagatggcttcatgagccagatgagaaggatcgtataggtgcctcacac
ttcagaaagattctttgctgttcttgtggaaagctggaaacatcttttggatatgatttc
gttgagatctccatctggggagaatcattcatgttgcatcaaattcggaaaatgatagga
accgctattgcagtgaagcggaaactgctcccaagagatgttatagcattgtcactgtcc
aagttctctagaatagttctacccattgctccagctgaagttttagtcctaagagggaac
agtttttccaacagaaaacgaccaggagttcctaagaggccagacttgctcacactgaac
gaatcagacgacattgtcaagtcagtgaatgaattctacagatcagcgatattacccgag
gtaactaacttcctggacacagaaagacccccttggaaagaatgggtggagaaattggac
aagtacacaagcattcccagtgaacaattggatgaagttaggaatgcttggaaagcatgg
aactacagggtacattga
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