Benincasa hispida (wax gourd): 120083211
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Entry
120083211 CDS
T07258
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120083211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120083211
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120083211
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
120083211
NCBI-ProteinID:
XP_038894793
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All DBs
Position
8:complement(15293099..15295943)
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AA seq
399 aa
AA seq
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MRKRKERPEISKTMAVAEEEKEDDEDEEEEEGSNEVNGFFSCYLLASACPRYKGHTYIGF
TVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVR
SAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPKHMKVQV
SPINELPCYSEGDQCVLENEDDWEYNRECEEICSFRVYGSMKEVSNEVPQKLMDHQASTD
GRPRELHGCDKEFENNEQVPPSSCNPSYIDAGMSYDLHGCDEELEEDEREPASCAPSCIV
TDISRTEIIIDDGDEDQIEGTGMNLEQQLCRKNLSSGIASEISKVSRCNIELPPVEYEVI
DVSTPSPDCRTNSHRVKRKVTSGRSEIIDLTKSPTFIQL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagaggaaagagagaccggaaatctctaaaaccatggctgtagcagaggaggag
aaggaagacgatgaagatgaagaagaagaagaagggagcaacgaagtgaatggcttcttt
tcgtgctatctcttggcctctgcttgccctcgttacaaaggccatacctatatcggattc
acggtgaacccgaaacgcagaatcagacagcacaatggtgaaattagatgcggtgcgtgg
cgtactaagaggaagagaccttgggagatggtcttgtgcatttatggcttccccactaat
gtctctgctcttcagtttgaatgggcgtggcagcatcctaatgagtcattggctgtaaga
agtgctgctgcaactttcaagtctctctctggagttgctaacaaagttaaacttgcatac
acaatgctcacacttcctgcttggtgtagtttgaatataactgtaaactacttctcaaca
aagtacatgaagaatgcggctggttgcccgagtttgccaaagcatatgaaggtccaagtt
tcccccatcaatgagcttccatgctattccgaaggagatcaatgtgtacttgaaaacgaa
gatgattgggagtataatagagaatgtgaagaaatttgtagttttcgagtatatggatca
atgaaagaagtttcaaatgaagttcctcaaaagttaatggatcatcaggctagtacagat
ggaagacctcgtgaattgcatggatgcgataaagaatttgagaataatgaacaagtgcca
ccttcttcatgtaatccgtcttatattgatgcaggtatgtcatatgacttgcatggatgt
gatgaagaactcgaggaggatgaacgagagccagcttcatgtgctccgtcttgtattgta
acagatatatctaggactgaaattatcattgatgatggagatgaagaccaaatagaaggg
actggtatgaacttggaacagcaactttgtaggaagaatttatcatcaggaatagcttct
gaaatcagcaaagtttcaaggtgtaatattgagcttcctcctgttgagtatgaggttata
gatgtgtctaccccgtctcccgactgccgaacgaattcgcatagagtcaagagaaaagtt
acttctggtaggtctgagatcattgatttgactaaatctcctacgtttatccaattgtag
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