Benincasa hispida (wax gourd): 120083227
Help
Entry
120083227 CDS
T07258
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120083227
03036 Chromosome and associated proteins [BR:
bhj03036
]
120083227
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120083227
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120083227
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120083227
microRNA pathway
RISC loading complex
120083227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF438
Motif
Other DBs
NCBI-GeneID:
120083227
NCBI-ProteinID:
XP_038894817
LinkDB
All DBs
Position
8:4822558..4829512
Genome browser
AA seq
974 aa
AA seq
DB search
MSRRGGGGGGGGGGRGSGGRGGQPSPAISRGGGGRGGGGRGGRGGGGRDGGRVGHPATQQ
FPSPTPQPTPIASPPPQTSTRASSSSLSGTTLSQSEVSKIEAQLEKMTLTPQQVPPSSSK
DLAVAKRPGYGAVGYKVLLRANHFLVQVADKDLYHYDVSITPEVSSKKVCRDIINQLATM
YRESHLGGRQIAYDGGKSVYVAGQLPFSSKEFTIKLVRKDDAGSSQPSRKEREFKVSIKF
AAKPDLHHLQQFSHGRRRDAPQETIQVLDVVLRTKPSIDYTVVGRSFFSQNFGKPGELGN
GVEYWRGYYQSLRPVQMGLSLNIDISARSFYEAICVTDYVAKHFNLRNFSKPISDQDCRK
IRRVLKGVKVALTCTEHGRTYKITGISSEPVNRLMFTLDDQRTRISVAQYFCEKYGVVLQ
FPSLPAIQAGNDAKPIYLPMEVCRIVGGQRYTKKLNERQVTEMLRATCQRPTDREHSITE
MVRKNDYAEDKIVKDFGIDVVKQLCDVHARVLPSPMLKYHETGKESRVDPRMGQWNMINK
KMINGGRVDYWGCVNFSARLDPGLPSEFCHQLVSMCISKGMVFNPTPLFPVRTAHANQIE
GVLKDIHNQSVRSLGPQRKSLQLLIIILPDISGFYGKIKRICETELGIVSQCCQPRQAQK
LNKQYFENVALKINVKVGGRNNVLNDAIQRKIPLVTDMPTIIIGADVTHPQPGEDSSPSI
AAVVASMDWPEVTKYRGIVSAQAHREEIIQDLYKEIQDPQKGLVRAGMIRELFIAFRRST
NMKPHRIIFYRDGVSEGQFSQVLFYEVDAIRKACASLEDGYQPPITFIVVQKRHHTRFFP
TSRDTDRSGNILPGTVVDTDICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENKFSADAM
QILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYMEGDSSDSGSMSSGGGNVEIQQL
PSIKENVKDVMFYC
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagaggtggtggtggtggtggcggcggcggcggccgtggttctggtggtcgt
ggaggacagccgtctccggctatatcccgcggcggaggtggcagaggcggtggtggaaga
ggtggacgaggcggtggagggagagacggaggtagggtaggtcatcctgctactcagcag
tttccttctccaactccacagcctactccgattgcttcccctcctccccagacttcaaca
agagcatcttcttcttccttatctggaactactctctcacagtctgaagtttcgaagatc
gaggcacaattggagaagatgacattgacgccacagcaagttccgccgtcttcatctaaa
gatttggctgtggcgaagcggccgggatatggagccgtcgggtacaaagttcttcttcga
gccaaccattttctggttcaagttgcagacaaagatctctaccattacgatgtttctatt
acacctgaggtttcatccaaaaaggtctgccgagatataataaaccagcttgcaacaatg
tatagagaatctcatctaggtggaagacaaatagcgtatgatggaggaaaaagtgtttac
gttgctggtcagcttccattttcgtccaaagagttcacgattaaattagtccgtaaagat
gatgcaggatcttcccaaccatcaaggaaagaacgtgagttcaaagtatctatcaaattt
gcagccaagccagacctccatcatctacaacagttttcacatggacgacggcgagatgct
ccacaggagactatacaagttcttgatgttgttttgagaacaaaaccatctatcgattac
acagttgttggaaggtcatttttctcgcaaaattttgggaaaccgggtgaactcggtaat
ggtgtagagtattggaggggatattaccaaagtctacgacctgtacaaatgggtctatct
ttgaatatagatatttctgctaggtcattttatgaagcaatatgtgtaacggactatgtt
gcaaaacacttcaacctaagaaatttctccaagccaatatctgatcaggactgtcgcaag
atcagaagggtacttaaaggtgtgaaggtggcattaacatgtacggagcatggcaggacc
tacaaaattactgggatatcgtcagagcctgtaaaccgattaatgtttactcttgatgat
cagagaacccgaatctctgttgcgcaatacttttgtgaaaaatatggtgttgtgctccaa
tttccatctctaccagctatacaagctggtaatgatgcaaagcccatctatttgccgatg
gaggtttgtaggattgttggtgggcagaggtataccaaaaaattgaatgaacgccaagta
actgagatgttaagagcgacttgtcagaggcctacagatagggaacacagtataacagag
atggttagaaagaatgattacgctgaagataaaattgttaaggattttggcattgacgtc
gtaaaacagttatgtgatgttcatgctcgtgttttgccatccccaatgctcaaatatcat
gaaactggcaaagaatcaagagttgatccaaggatgggtcagtggaatatgattaataag
aaaatgatcaatggtggtagagttgattattggggttgtgtgaacttctctgcacggttg
gacccaggcttgccatctgaattttgccatcagttggttagcatgtgcattagcaaagga
atggttttcaaccctactccactgtttcctgtacgtactgcacatgcaaaccaaattgaa
ggggttcttaaagacattcataatcagtctgtaagaagtttggggccccagcgcaagtct
cttcagttgctcataattattttacctgatatttcaggtttctacgggaagatcaaaagg
atatgcgagaccgagcttggaattgtttcacaatgttgccagcctaggcaagctcaaaag
ctaaacaagcagtactttgaaaatgtggccctcaaaatcaacgttaaggttgggggaaga
aacaatgtcctaaacgatgctattcagcgaaaaattcctcttgttacggatatgcctacg
ataatcattggagcagatgtaacacacccacaaccaggagaggactccagtccttccatc
gcagctgttgttgcctcaatggactggcccgaggtaacaaagtacagaggaattgtttca
gctcaggctcaccgtgaagaaattatacaagatttgtacaaagagattcaagatcctcag
aaagggttggtgcgtgcagggatgattagggagctgttcattgcttttagaaggtcgaca
aatatgaaaccgcacagaataatattctacagagatggtgtgagtgaaggacagttctct
caagttctattttatgaggtggatgcaatcaggaaggcatgtgcctcgcttgaagatggt
taccagcccccaataacctttattgtggtgcaaaagagacatcatacccgttttttccct
accagccgggatactgatcggagtggaaacatccttccaggtactgttgtcgatacggat
atttgtcatccaactgaatttgatttctatttaaacagccatgctggcattcaggggaca
agtagaccaacacattatcatgttctgtatgatgaaaacaaatttagtgccgatgcaatg
caaatacttactaataatctatgctacacgtatgcacggtgcacacggtctgtttccatt
gttccaccagcatactacgcccatcttgcagcatttcgtgctcgatattacatggagggt
gattcatccgacagtggttccatgagttcaggtggtgggaatgtagagattcaacaactg
ccgagcataaaagaaaatgtgaaggatgtcatgttttactgttga
DBGET
integrated database retrieval system
