Benincasa hispida (wax gourd): 120083296
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Entry
120083296 CDS
T07258
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120083296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120083296
03110 Chaperones and folding catalysts [BR:
bhj03110
]
120083296
03029 Mitochondrial biogenesis [BR:
bhj03029
]
120083296
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120083296
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120083296
Messenger RNA biogenesis [BR:
bhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120083296
Chaperones and folding catalysts [BR:
bhj03110
]
Heat shock proteins
HSP60 / Chaperonin
120083296
Mitochondrial biogenesis [BR:
bhj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120083296
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120083296
Exosomal proteins of other body fluids (saliva and urine)
120083296
Exosomal proteins of breast cancer cells
120083296
Exosomal proteins of colorectal cancer cells
120083296
Exosomal proteins of bladder cancer cells
120083296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120083296
NCBI-ProteinID:
XP_038894909
LinkDB
All DBs
Position
8:complement(27808785..27817697)
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AA seq
587 aa
AA seq
DB search
MEVYSRLSSPPPFARTLLFPVTKLGGSQRLSGYARNSWKMRNFVVRAGPKRISFGKECRG
ALLAGIDKLADAVSVTLGPKGRNVILSEQGMLKVINDGVTIAKAIELSDAIENAGVVLIQ
EVASKMNDLAGDGTTTAIILAREMIKSGLLAVSFGADPVSLKKGMDKTVKELIKVLKKKS
TPVQGKDDIKAVAMISSGNDEYVGNLIAEAIEKIGPDGVISIESSKSSETSVIIEEGMKI
DKGYMSPQFITNQDKSIVEFDNAKVLVTDQRISTVKEIVPLLEKTVQLSLPLLIIAEDIS
RQVLETLVLNKVQGLINVAVVKCPGLGERKKALLQDIALMTGADFLSGDLGLGLEGATSD
QLGIARKVVITSNSTTIVADPSTKAEIQARISQIKKDLVETDNSYLSKKLSERIAKLSGG
VAVIKVGAHTEVELEDRKLRIEDAKNAVFAAMTEGIVPGGGATYVHLSELLPTIKQSMED
QDEQIGADIVGKALLAPTKLIASNAGDDGVVVVEKTRACDWRHGYNAMADKYEDLFNAGV
VDPCLVSRCALQIAASITGIVLTTQAIMVEKTNKPKPPIPLVPGISP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttattcccgtctctcctcaccgccgccctttgcccgaactcttctcttccct
gtaacgaagcttggtgggagtcaaaggctatctgggtacgcgagaaattcatggaagatg
agaaattttgtcgtcagggccggtcctaagaggatatcttttggtaaagaatgcagaggg
gccttgctagctggtattgataagttagctgatgctgtttctgtcactttaggacctaaa
ggccgcaatgttattctctctgaacagggaatgcttaaagtgattaatgacggggttaca
attgcgaaagctattgagctttctgatgcaattgagaatgcaggagtggttctgatccaa
gaggttgctagtaaaatgaacgacttggctggcgatggaaccaccaccgcaataattttg
gcacgtgaaatgatcaaatctggattattggcagtttcctttggggctgatccagtttcc
ttaaagaaaggaatggataagactgtaaaggagttaatcaaggtcttaaagaagaaaagt
actcctgtacaaggaaaagatgatattaaagctgttgcaatgatatcttctggaaatgat
gaatatgtggggaacttaattgctgaagcaatagaaaagattggtcctgatggtgtgatc
tcaattgagtcatccaaatcctctgaaacttctgtaataatagaggaaggaatgaagatt
gataaaggttatatgtcgcctcagtttattacaaaccaagataagtctattgtggagttt
gacaatgcaaaagtcctagtaaccgatcaaagaatttctactgtcaaagaaattgtccct
ttgttggaaaagaccgtacaacttagtcttcctctgctgataatcgcagaggacatctca
agacaagttctagaaaccctagtgctgaacaaggtacagggtttaattaatgtggccgtt
gtaaaatgtcctgggcttggtgaaagaaagaaagctctattgcaagatattgcactaatg
acaggtgctgattttctctctggagatttgggactaggacttgagggtgctacttcggat
cagcttggaattgctaggaaagtagttataacatctaattcaacaacaatagttgcagat
ccctcgactaaagctgaaattcaagcaagaatttcacagattaagaaggatcttgttgaa
acagataattcctacctctcaaaaaagctgtcggagaggattgctaagctttctggtgga
gttgctgtcatcaaggtcggagcacatactgaggtggaacttgaagacagaaaactcaga
attgaggatgcaaagaatgctgtatttgctgccatgactgaaggaattgttcctggtgga
ggtgctacctatgttcatctgtctgaattgcttcctaccataaaacaatcaatggaagat
caagatgagcagattggtgctgatattgtgggcaaggcacttcttgcacctacaaaactc
attgcaagtaatgcaggggatgatggagtagttgttgtggagaaaactcgagcatgtgat
tggcgacatgggtataatgcaatggcagacaaatacgaagatctttttaatgctggtgta
gtagatccttgccttgtttcaagatgtgcgcttcagattgcagcctcaattaccgggatc
gttttaacgactcaagccattatggtagagaaaacaaataagccaaaaccacccattcct
cttgttcctgggatatctccatga
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