KEGG   Benincasa hispida (wax gourd): 120083304
Entry
120083304         CDS       T07258                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
bhj  Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120083304
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    120083304
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 DEAD RING_XB3-XBAT31 Prok-RING_4 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 U-box
Other DBs
NCBI-GeneID: 120083304
NCBI-ProteinID: XP_038894922
LinkDB
Position
8:complement(3846776..3856062)
AA seq 1038 aa
MGSKMNDELVSTIRSIVGPDFSYMDVIRALHLANNDATAAINIIYDTPSFGARDKPRVQE
NSDVLHVPCVPSSESKPVVSTSKRVRDEGANFPSPEESSTRSPCNVGVIKDVVVEVSSPC
SSLIGNEWWLVGCAEVAGLSTAKGRKVKPGDGVAFTFPSRNGCKTPSPAKVFGKGRHMAN
GSEIVRFSTKDSGEIGRIPNEWARCLVPLVRDKKVRIEGSCKSAPEVLALMDTILLSISI
YINSSLLRKHQQTSLKAASNAAAESVIHPLPTLFRLLGLTSFKKAEFTPEDLSGRKRLLD
SKVSYSLPSSLAHTLKNCSQNDNGTENEESISDIDLENIVGAGDTSELEEMDPPSALLCE
LRPYQKQALHWMIHLEKGKCMDEAATTLHPCWEAYRLADKRELVIYLNSFSGEATTEFPS
TLQIARGGILADAMGLGKTIMTISLLLAHSERGGVSNSQLTRSSIEGDEGNIDQSLNSLK
KAKITGFEKLSQQRNTLASGGNLIICPMTLLGQWKAEIEAHVRPGSLSIHVHYGQTRFKD
ARALTQNDVVITTYGVLASEFSTENAEEGGLYSVRWFRVVLDEAHTIKSSKSQISIAASA
LVADRRWCLTGTPIQNNLEDIFSLLRFLRIEPWGNWAWWNKIIQKPFEEGDERGLKLVQS
ILKPIMLRRTKYSKDREGRPILVLPPADVQVIYCGLTDAEKDFYEALFKRSKVKFDQFVE
QGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGTPNTQVGEGR
DLPSHAYVQEVIEELRSGEHGECPICLEVFEDAVLTPCAHRMCRECLLASWRNSSSGLCP
VCRKAINKQDLITAPTENRFQIDIEKNWVESSKVVALMNELETIRLSGSKSILFSQWTAF
LDLLQVPLSRSNIPFLRLDGTLSQQQREKVIKEFSEDNGILVLLMSLKAGGVGINLTAAS
NAFVLDPWWNPAVEEQAVMRIHRIGQTKSVKIKRFIVKGTVEERMEAVQARKQRLISGAL
TDQEVRSARIEELKMLFT
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgggaagcaagatgaacgacgaactcgtttccacgatacgctccattgtcggtcccgac
ttctcctatatggatgttatcagagccctccacttggccaataacgacgccaccgctgcc
attaatataatctacgatacccctagtttcggagcgagggataaaccgcgagttcaggaa
aattctgatgttcttcatgttccttgcgttccgagttctgagagcaagcctgttgtctct
acgtcgaagagggttcgggatgaaggtgctaatttcccgtcgcctgaggaaagttctact
cggagtccgtgtaatgttggtgtcatcaaggatgtcgtcgtggaagtctctagtccatgt
tcgagtttgattgggaatgagtggtggctcgttggctgtgctgaagtggccgggctgtct
acggctaaaggcaggaaggtgaagcctggagatggagtggcattcacatttccttcgagg
aatgggtgtaaaacaccttcaccggctaaggttttcgggaagggaaggcacatggccaat
ggttcggagattgtgaggttttctacaaaagattctggggagattggtcgaatacccaat
gaatgggctcgatgccttgtgccattggtgagggataaaaaggttagaatagagggttcg
tgtaaatctgcaccagaggtgctggccttaatggatacgattcttttatctataagtata
tacattaacagttctttgcttcgtaagcaccagcagacctctctcaaagcagctagcaat
gcagctgcagaatcagttattcatcctctcccaactttgtttcggcttcttggtttaaca
tcttttaagaaggctgagtttactccagaggacttgagtggaagaaaacgactgctggac
tcaaaggttagttatagtctgccatcctcattagcgcataccttgaagaattgttctcaa
aatgataatgggactgaaaatgaagagtcaatatcagatattgatcttgagaatattgtt
ggtgctggggatacttcggagctggaggaaatggatccacccagtgccttgctatgtgaa
cttcggccctaccaaaagcaggctcttcattggatgatccatctggagaaaggaaagtgc
atggatgaggctgcaacaacccttcatccatgttgggaagcttatcgtcttgcagacaag
agggaacttgtcatctatttaaattccttttctggtgaggcaacgacagagttcccaagc
actctccaaatagccagaggagggattctggctgatgccatgggcctcgggaagaccatc
atgaccatatcacttcttcttgctcattcagaaagaggtggagtatccaatagtcagctg
acacgttcctccattgagggtgatgaaggaaacattgaccaatctttgaattctttgaag
aaggccaaaattacaggttttgaaaagttgtcgcagcagaggaacaccttagcaagcggc
ggcaatctgattatttgtcccatgactcttctaggacaatggaaggcagagattgaagct
cacgtgcgacctggatctctgtctatacatgttcattatgggcaaactagattcaaggat
gctagagctttgacacaaaatgatgtcgtaatcactacctatggggttttagcctcagaa
ttttctacagagaatgctgaagaaggtggactctattcagttaggtggttcagagttgtt
cttgacgaggctcacactattaagtcctctaaaagccaaatatccattgctgcttctgca
ctagttgctgaccgtcgctggtgtcttactggtactcctattcagaacaacctggaggat
atctttagtcttcttcgatttttgcggattgaaccatggggaaattgggcgtggtggaat
aaaatcattcaaaaaccatttgaagaaggtgatgagcgggggctaaaattggttcaatcc
atcttaaagccgatcatgctgaggaggactaaatatagtaaggatcgagaaggcaggcca
attttagttcttcctccagctgatgtccaggtgatttactgtggacttacagatgctgaa
aaagatttctacgaggcactcttcaagagatccaaggtgaaatttgaccaatttgttgag
caaggacgtgtccttcacaattatgcatcaatactggagttacttttacgtcttcgccaa
tgttgtgatcatccctttcttgtgatgagtcgaggtgatacccaagaatattctgatcta
aataagctagcaaagcgttttcttaaaggcactccaaacacacaggtaggagaagggaga
gatctgccttctcatgcttatgtccaagaagttattgaagagcttcgcagcggtgaacat
ggagaatgtccaatctgtctcgaggtatttgaagatgcagtattaacaccatgtgctcac
cgtatgtgccgagagtgccttttggcaagttggagaaactctagttctggtttatgtcca
gtttgtaggaaagcgatcaataaacaggatcttataactgctccaactgagaatcgtttc
cagattgatattgagaaaaattgggttgaatcatccaaagttgtggctctgatgaatgaa
cttgaaactattcgtttgtcagggtcgaaaagtattttattcagccagtggactgccttt
cttgatcttttacaagttcctctctctcggagtaatattccttttctccgattggatgga
actttaagtcaacagcagagagaaaaagtaataaaggagttttcagaggataatggaatt
ctggtgttgttgatgtcacttaaagctggtggagttggaataaatttgacagctgcttca
aatgccttcgttttggacccatggtggaatccagcagttgaagaacaagcagttatgcgc
attcatcgcattgggcaaactaaaagtgtgaaaataaaacgctttatagtgaagggtact
gtggaggaaaggatggaggcagtacaagcaagaaaacaacgattaatttccggtgcctta
acagatcaagaagttcgaagtgcacgaattgaagaattgaagatgctttttacttga

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