Benincasa hispida (wax gourd): 120083487
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Entry
120083487 CDS
T07258
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhj03000
]
120083487
04121 Ubiquitin system [BR:
bhj04121
]
120083487
Transcription factors [BR:
bhj03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120083487
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
120083487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
RNA_bind
NCBP3
Motif
Other DBs
NCBI-GeneID:
120083487
NCBI-ProteinID:
XP_038895187
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All DBs
Position
8:complement(40399177..40404842)
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AA seq
1188 aa
AA seq
DB search
MNQEAVCEGDHFLTAQAISKCGTQSHPLPYKLPETASTSLLAFPSKLKIPISLSISSPEP
EDDYNHRPLSPSSPFRSSFDQNMSSHVRNVRKDRSRFPASSARQEWVARGSTTTTTTTTT
TTTTAIPVNQPLNVNLNDNRNGLELNSSPPHPVCRDRGNHGPRVHVGPRRNQRKDKEKDK
EKSGGQGEKELRISNLPQLVHEIQEKLMKGTVECMICYDMVRRSAPIWSCSSCFCIFHLT
CIKKWARAPTSTDLVAEKNQGLNWRCPGCQSVQLTSSKEIRYVCFCGKRQDPPSDLYLTP
HSCGEPCGKPLDREMMVAGGSKEDLCPHNCVLQCHPGPCPPCKAFAPPRLCPCGKKLITT
RCSDRKSTLTCGQHCEKLLDCGRHWCEKICHVGTCDPCQVQVSASCFCKKKKELVLCGSM
TLKGEINTEDGVFPCSSICGKTLNCGNHVCREICHPGPCEGCDLMPDMIKTCYCGKTRLQ
DERTSCLDPIPTCSELCEKLLPCGKHHCKDVCHAGDCAPCLVQVVQKCRCGSTSRNVECY
KTSSPTDIFTCEKPCGWKKNCGRHRCSERCCPLSNSSYNHLGDWDPHFCVMRCGKKLRCR
QHSCQSLCHSGHCSPCPETIFTDLTCACGKTSIPPPLPCGTPPPSCQLPCSVPQPCGHCS
THSCHFGDCPPCTVPIAKECIGGHVVLRNIPCGSRDIRCNKLCGKTRQCGMHACNRTCHP
PPCDTAAGSDLGQKTSCGQTCGAPRRDCRHTCTAPCHPSAPCPDARCEFPVIITCSCGRI
TASVPCDAGGSSIGFNTDTLYASIIQKLPVPLQPIEATGKKIPLGQRKLTCDDECSKLER
NRVLADAFDINPPNLDALHFGDSSASELLADLFRRDSKWVLAVEERCKFLVLGKNRGTMS
GLKVHVFCPMAKDKRDAVRLIAERWKLAINSVGWEPKRFITIHVTPKSKAPPRVLGIKGS
TTTSTLYPPSYDPLVDMDPRLVVSFPDLPRESDISALVLRFGGECELVWLNDKNALAVFS
DPARAATAMRRLDHGTAYHGASALQNGGASASSNANAWGGGENAKEGGASKSSNPWKRVV
VQDSSWKDTSWGDEEWSGSSIDVQASVWKREAPLPASLNRWHALDTESAVSSSTRSPEHN
IGNRVGHSSLGSESGTSRNLSSAGGIQVVTDDGTNTSEVADDWEKAYE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaggcggtgtgcgagggggaccacttccttacggcccaagcgattagcaaa
tgcggaacccaaagccacccgcttccctataaattgccggaaaccgcttcgacctcactt
ctcgcctttcccagcaaattaaaaatccccatttctctttcaatttcatcaccggagccg
gaggacgattacaatcaccgccctctgtcgccttcttcgccatttcggagttccttcgat
cagaatatgagctcacatgtccgaaatgtgcggaaggataggtctagatttcctgcatca
agtgctcgacaagagtgggtagcgagaggatccacgacaaccactactaccacaactaca
actacgaccacggctattcctgtgaatcagccattgaacgtcaatttgaatgataatcgg
aatgggctagagctaaattctagccctcctcatccagtttgtcgagacagaggtaatcat
ggtccaagggttcatgtgggtcctcgaaggaatcaaagaaaggacaaggaaaaagataag
gagaaaagtgggggtcagggtgaaaaggagttgagaatctccaacttgcctcagctagtt
catgaaattcaggaaaaattgatgaagggcactgttgagtgcatgatttgttatgatatg
gtgcggagatctgcacccatatggtcttgttcaagctgcttttgcatttttcatttaact
tgcatcaagaaatgggctagagcacccacttccaccgacttggtagctgagaagaatcag
ggattaaattggcgttgtcctggatgccaatctgtgcagcttacgtcttcgaaggagatt
cgatatgtttgtttctgtggtaaaaggcaggatcccccttctgacttgtatttgacaccc
cattcatgtggggaaccatgtggcaagccacttgatcgagagatgatggttgctggtgga
agcaaggaggatctttgtccccataattgtgtcttgcagtgccatccaggtccctgccct
ccttgcaaggcatttgctcctccccgtttatgcccttgtggcaagaagttgataacaaca
cgttgttcagataggaaatccactttaacttgtggtcagcattgtgaaaaactcctggat
tgtggacgtcactggtgtgaaaaaatatgccatgtgggtacttgtgatccttgtcaggtt
caagttagtgcctcttgcttttgcaagaaaaagaaagagcttgttctttgtggaagcatg
actttgaagggtgaaataaatacagaagatggtgttttcccctgtagttccatctgtggg
aagactcttaactgcggcaatcatgtctgccgtgaaatttgtcatccaggaccctgtgaa
ggctgtgatttaatgcctgacatgattaagacatgttattgtggtaaaacacgattgcag
gacgaacggacaagttgtttggatccaatcccaacatgttctgagctctgtgagaaacta
ttaccttgtgggaagcatcattgtaaggatgtctgtcacgctggagattgtgcaccttgc
ttggttcaagttgtgcaaaaatgccggtgtggatcaacttctcgaaatgtggaatgctac
aagacttccagcccaactgacatattcacttgcgaaaagccatgcgggtggaagaagaat
tgtggaaggcacaggtgcagtgagaggtgctgtcctctatcaaactccagctataatcat
ttaggagattgggatccacacttttgtgtaatgagatgtgggaagaaactaaggtgtcgc
cagcactcttgtcaatcactgtgtcatagtggccattgctctccatgtcccgagacaatc
ttcacagacttgacatgtgcttgtggtaaaacttcaattcctccacccttgccttgtgga
acaccgcccccatcatgtcaactgccatgttccgtccctcagccatgtggccattgttct
actcatagctgtcactttggtgactgcccgccttgtacagttccaatagccaaggagtgc
atcggtggacatgtagttctaaggaacattccttgcggttcaagggacatcagatgcaac
aagctatgtgggaaaactaggcagtgtgggatgcatgcctgcaacagaacttgtcacccg
ccaccgtgtgacactgctgctggatctgatttgggtcagaaaacttcctgtggacagaca
tgtggtgcgcctcgaagagattgtaggcatacatgtactgcgccatgtcacccatctgct
ccttgccccgatgcaagatgtgaattccctgttatcatcacttgttcatgtggccgaata
acagcatctgttccttgcgatgctggagggagcagtattggtttcaatactgatactctg
tatgcttcaattattcaaaaattacctgttccgcttcaacccattgaggcaactggcaaa
aagattccactaggacagagaaaactgacatgtgatgatgaatgctctaagctagagagg
aatcgggttcttgcagatgcttttgatatcaatcccccaaatttggatgcccttcacttc
ggcgatagttctgcttctgaattgcttgcagacctctttagacgtgattcaaaatgggta
ttggctgtggaggagagatgcaaattcctggtccttgggaagaatagaggaacaatgagt
ggccttaaagttcatgttttctgtccaatggccaaggataagagagatgctgtcaggctg
attgctgagaggtggaagcttgcgatcaattcggttggctgggagcccaaacgtttcatt
acaattcatgttactcctaaatcaaaagctccgcctcgggtgcttggtattaagggctca
accaccaccagtactctatatccaccatcttacgatcctttagtagatatggatcctagg
ctagttgtttcttttccagatttgcctagggaatcagacataagtgcattagtcttaagg
tttggtggggaatgtgaattagtatggttgaacgacaagaatgctttggctgtcttcagc
gatcctgctcgagcagctactgcaatgagaaggttggatcatgggacagcgtatcatgga
gccagtgctcttcagaatggtggtgcatcagcatcatctaatgcaaatgcttggggagga
ggggagaatgcaaaggaaggtggagcatcaaagagtagtaatccatggaaaagggtcgta
gttcaggactctagttggaaggacacttcatggggcgatgaagaatggtccggttcatct
atcgacgttcaggcatccgtatggaaaagagaagctccacttcctgcttcacttaatcgg
tggcatgcgttggacaccgaatctgctgtgagttcttccactcgatctcccgaacacaat
attggcaatcgggttggccattcctctttaggatctgaatcaggcacaagtaggaacctg
agctctgcaggagggatacaggttgtaacagatgatggaacaaacacgtcggaagtggca
gatgattgggagaaggcttatgaatga
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integrated database retrieval system
