Benincasa hispida (wax gourd): 120083748
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Entry
120083748 CDS
T07258
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120083748
Membrane trafficking [BR:
bhj04131
]
Protein recycling
Others
EARP complex
120083748
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
120083748
NCBI-ProteinID:
XP_038895533
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All DBs
Position
8:4028752..4109694
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AA seq
1093 aa
AA seq
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MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS
ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE
VEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAERLSHHVMEHHE
VMVKGMHLVRELEKDLKIANVICRNGKRHLNSSMLEVSRDLIVNSNSKKKQALLDMLPVL
SELRHAVDMQSMLETLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIWLGRTL
QKLDSLLIEVCQEFKKEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSALKDIVQ
EDQDVHIQNSRLTYSDLCFRIPESKFRLCLLKTLAVLFTLMCSYYQILSFQLDTKDSIEQ
TRSMKQPEDNHDINLGDTEELTINVSSMGSTGITNSVYMDGGDSNRESRTDSSTASTSGS
PWYHLRKDAIHFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDLNVFI
LAGEAFCGVEAVEFRQKLKTVCENYYVAFHKQSMHALKMVMEKENWLTLPSDTVQVVSFA
GLLGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLKSGNPFLLKLMHTCK
EGTPNGIHYGEVDGSVGESPHRSNASPTKYPDNLANGANTVSEDEDEDLLADFIDEDSQL
PSRISKPKLSRNHSSNHSNDDITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGMCQL
FEVFFYFVYETFGQPSTSSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSPSASSST
FSFNEVTPSPPGTSLGYLHGTSFGLKERSAGADSLSLVARIMHRSKAHIQSMLLQTNVAV
IEDFYVHLLDAVPYLIEHIHKNTARLLLHVSGYVDRIANAKWEVKELGLEHNGYVDLLLG
EFKHYKTRLAHSGVRKEVQDLLLEYGLDIVAETLIEGISRVKRCSDEGRALMSLDLQVLI
NGLQHFVSANVRPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQVIGLVNLVASMKGW
KRKTRLEILEKIE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaacctgtttccatttggtagtgttctcggaaaccctttggcgttcgatggt
gatttgagcgaaggattcgagacttccaggtttctcttctttgttccgtttcttctgctg
caaggaggtggaatggacttgtccaaggttggggagaagattttgagctccgtgaggtca
gctagatcgcttggacttcttcctaccacttctgatcggccggaggttccagcacgtgct
gtggctgcagcagctgttgcccgtgtgcttgcaggattgcctcctcaccagagatttagt
ctctcatctagctcggaagaactgagctcaatatatggcagtagaaatcatggccacgaa
gtagaggaactagaggaagttttctatgaagaggactttgacccagttaggcatgtgtta
gagcatgttccatcagaagaaaatgatctggaatatttggagaaacaggctactaagaga
ttagctcaacttgataaagtggctgaacgtttatctcaccatgtaatggagcatcatgaa
gtgatggtgaaggggatgcatttggtcagggagttggaaaaagacttgaaaattgcgaat
gtcatctgcaggaatgggaagagacacctaaattcgtcaatgctcgaagtctctagagat
cttattgtaaactctaactccaagaagaaacaagcacttctggacatgcttccagttttg
agtgagcttcgtcatgctgtggacatgcaatcaatgctcgagacccttgttgaagaggga
aattattataaggcgtttcaggtcttatctgagtatttgcagctattggatagtttttca
gagctttcagtaattcaggagatgagccgtggcgttgagatttggcttggaagaaccctg
caaaagttggattcacttttgatagaagtctgccaggagttcaagaaggaggcctattta
accgtggttgatgcctatgcactaataggggatgtctccggtctcgctgaaaagatacaa
agcttttttatgcaggaagttatatcagaaacccattctgccttgaaagacattgtgcaa
gaggatcaggatgtacatatacaaaatagtaggcttacatacagtgatctatgctttcgg
atacctgaatcgaagtttaggctgtgtttattaaaaacactagctgttttatttaccttg
atgtgctcatattatcaaatcttaagcttccaactggataccaaggattcaattgaacaa
actcgtagcatgaagcaaccagaagataatcatgacattaatttaggagatactgaggaa
ttgacaatcaatgtctcttcaatggggagtacaggaattacaaattctgtttacatggat
gggggtgattccaatagggagtcccggacggatagcagtacagcatcaaccagtggttct
ccctggtatcatctgagaaaagatgctatacattttgtttcccaaaccctacaaagaggc
cgtaagaacctttggcaactaactactagtcgcgtgtcggtacttctttcttctgctgct
gtttgttcgacgagcattcatcaattcttgaaaaactacgaagatctcaatgtcttcata
ttggctggagaagccttctgtggagttgaagcagttgaatttaggcaaaagttgaagact
gtatgtgaaaactattatgttgctttccataagcagagtatgcacgctctaaagatggtt
atggaaaaagagaattggcttacactgccatcagatacggttcaagttgttagttttgct
ggacttcttggtgatggggcacctttgtttgttacatctgagggtaactcatctaatggc
aaggtcccacgttcagataagtcaacaagctcaatcagtacaggcatggatagaagtggt
tttttgcagtggctcaaaagtggaaatccatttttacttaaactaatgcatacttgtaag
gaaggcacaccaaatggtatccattatggagaagtggatggaagtgtaggtgaaagtcct
cataggagtaatgcctctccaactaaatatccagacaatcttgcaaatggtgctaatact
gtttctgaagatgaagatgaagatcttttagctgactttattgatgaagatagtcaactc
ccaagcagaatttcgaaacccaaactttcacgaaaccactcttctaaccatagtaatgat
gatattacagcacaaacaggatcatctctatgccttttaaggtccatggacaaatatgca
aggcttatgcagaaactagagattgtgaatgttgagtttttcaagggaatgtgccagttg
tttgaagtgttcttctattttgtatacgagacttttggccagcctagcacttcttctggt
ggaaaaggctttccagactccctcaattataagttgaagacagccttgtcaagagctgca
caggattgtgagcagtggataagaccccattcatcttccccatcagcttcgagttcgaca
ttttctttcaacgaagttaccccaagccctcctggcactagcttaggttacttgcatgga
acgtcttttggtctcaaggaaaggagtgcaggtgctgactcattatcacttgtggcgaga
ataatgcataggtcgaaagctcatattcagtccatgcttctgcaaactaatgtggctgta
attgaagacttttacgtacatctgttggatgccgtcccatatctcattgagcatatacat
aagaacactgcaagactacttcttcatgtcagtggttatgttgatcggatagccaatgca
aaatgggaagtaaaagagcttggactagagcataatgggtatgttgacttgttattggga
gaattcaagcattataaaacaaggctggctcatagtggagttcgtaaggaggttcaagac
ctcctcttggagtatggactggatattgttgcagaaacccttatcgaaggtatatcacga
gtaaagagatgttcagatgaaggacgcgctctcatgtcattagatcttcaggtgttaatc
aatggcttgcaacattttgtttctgcgaacgtgaggcctaagttacaaatggttgagacc
tttattaaggcatactaccttccagaaactgaatacgtacactgggcacgagctcacccg
gaatacagtaagagccaagttattggtctggttaacttggttgcatcgatgaaagggtgg
aagaggaaaacccggttggaaatattggagaagattgagtga
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