Benincasa hispida (wax gourd): 120084001
Help
Entry
120084001 CDS
T07258
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120084001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120084001
03036 Chromosome and associated proteins [BR:
bhj03036
]
120084001
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120084001
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120084001
PBAF complex
120084001
GBAF(ncBAF) complex
120084001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
MurB_C
Motif
Other DBs
NCBI-GeneID:
120084001
NCBI-ProteinID:
XP_038895835
LinkDB
All DBs
Position
1:47818298..47821733
Genome browser
AA seq
547 aa
AA seq
DB search
MSINNNNPPKSLGGASSSPFGNSGMVPPSMAANSTSFSQPQAQAQLGAGFQNPFPLCTAQ
VLAQAQLKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNMGSPSPGFSTPGLAG
VKRIPQKPPVRPPILSPGTTFSPLKTMEITPAARKKKQKLPEKQLQDKVAAILPESALYT
QLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTVPKKPNADPPTW
TLKIIGRILEDGIDPDHPGLVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARS
PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV
KARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNS
PVGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLG
FSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATG
SDAPGST
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaacaataataacccaccgaagagccttgggggggcttcttcatcgcctttt
ggaaattctgggatggttccgccatctatggcagcaaattccacatcgttttctcagccg
caagctcaagctcaattaggagctgggtttcaaaatccatttccgctgtgcactgctcag
gttcttgctcaagctcaattaaaggctcacgctcatgcccaagctcaagcacaggcagct
cacgctcagtttcaagctcaattacaagctcaagggctgtccctaactcagagccagaat
gttggtggtgggaacatgggttcgccttcaccaggattttccacaccgggtcttgctggt
gtgaagcgaattcctcaaaagccgccagttcggcctcctattctttctcctggtaccaca
ttttcgccgttgaaaacaatggaaatcacgcccgctgctcgcaaaaagaagcagaagttg
cctgagaagcagcttcaagataaagttgctgcaattttgcccgaatctgctctctacact
cagctgcttgagtttgagtctcgtgttgatgctgctctcgcaagaaagaaagttgacatc
catgaggcgcttaaaaacccaccttgcattcagaaaactcttcgaatttatgtcttcaac
acatttgcaaatcaagttaacacagtacccaaaaaaccaaatgccgatcctcctacctgg
actcttaagataataggtaggatcttggaagatgggatagatcccgatcatcctgggttg
gtacaaagatcaaaccctttgtaccctaaattttcatctttcttcaagagagtaacaatt
tccttggaccagaggttatatccagatagtcacatcatagtatgggagaatgctcgatca
cctgcacctcatgagggctttgaggtaaagagaaaaggggataaagaattttcagttaat
attcggttagaaatgaattatattccagagaaattcaagttgtcgcctgctttgatggaa
gttcttggtattgaagttgatactcgcccaagaattatagctgcaatctggcattatgta
aaggctaggaaacttcagaatcccaatgatccatctttctttcattgtgatccacctctc
cagaaggtatttggggaagacaaattgaaattcacaatggtttcacagagaatatcacaa
cacttgtttcctccacagcctatacatctggagcataagattaagctttcggggaatagt
ccagtaggtacagcatgttacgatgtgttggtcgatgtgcctttcccaattcacagggaa
ttgtctgctctattagccaatgcagagaagaacaaggagattgatgcatgtgatgaagca
atttgtaccgctataaggaaaattcacgagcatcgacggagacgtgcatttttccttggg
ttcagtcagtcaccagtggagtttattgatgccttgattgaatctcaaagcaaggatctg
aaacttcttgcaggagaagctagtcgaaatgctgaaaaggagcgacgatcagatttcttc
aatcaaccatgggttgaagatgctgtcatccggtacataaatcgaaaaccagccacaggg
agcgatgcgcctggaagtacatga
DBGET
integrated database retrieval system
