Benincasa hispida (wax gourd): 120084198
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Entry
120084198 CDS
T07258
Name
(RefSeq) putative pectate lyase 2 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120084198
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120084198
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120084198
NCBI-ProteinID:
XP_038896018
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Position
8:57583258..57584587
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AA seq
343 aa
AA seq
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MNAIDRCWRSNPYWRRNRQQLAICSIGFAGKMTNNIGRNLIQYQVTDPSDDPTNPRPGTL
RYGATMIKSKVWITFRKDMHIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII
HGLIIHHCRAQAAGQVMGPNSKIITLGHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT
RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH
VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIIWSTGKVEQAKWKFHSVRDVFEN
GALFAQIGSGRGNVKPNYNAQQRFPVADAKWLRSLTSNSGALQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccattgacagatgctggagatcgaacccatattggagaagaaacaggcaacaa
ttagccatttgctcaattgggttcgctggaaaaatgaccaataacattggaagaaatctc
atacaataccaagtcacggaccctagtgatgaccctacaaacccacgtccaggtacacta
agatacggcgccacaatgatcaagtccaaagtctggatcacattccgaaaagacatgcat
attgtgcttaagaagccgcttcttattagcagcttcaccgccatcgacggccgaggcgcc
accgtccacatcaccgggaatgcgtgtctgatggtgttcaaggccaccaacattataatc
cacggccttatcatccaccactgtagggctcaggcggcgggtcaagtcatgggccccaat
tccaagatcattacgcttggacacgtggacggcgatgccatccgtttagtaacggcctca
aaagtgtggattgaccacaacacactgtaccgttgtgaggatgggttgcttgacgtcact
cgtgggtccactgacatcaccatttctaacaattggttccgagaccaagataaggttatt
cttcttggccatgatgacggttatgtccgagatcggaacatgagagtcactgttgtctat
aaccattttggaccaaattgcaaccaaagaatgcctaggatccgatatgggtatgcacat
gtggcgaacaatttgtatcaaggttggacgcaatatgcaattggaggaagcatgaatccg
agtgtgaagagtgaagccaaccttttcattgcatcaaagtcaaaacagattatatggagc
acagggaaagtagagcaggcgaaatggaagtttcattcggtaagagacgtatttgaaaac
ggagctttatttgcacaaattggtagtgggagaggaaatgtaaaaccaaattacaacgcc
caacaacggtttccagttgcagatgccaaatggctcagatcattgacaagcaactccgga
gcattgcagtga
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