Benincasa hispida (wax gourd): 120084932
Help
Entry
120084932 CDS
T07258
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120084932
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
120084932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
120084932
NCBI-ProteinID:
XP_038896673
LinkDB
All DBs
Position
1:6235904..6244704
Genome browser
AA seq
626 aa
AA seq
DB search
MGAEFENGQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDNDGYNQLIGVIHHKDRLSPD
EIALLVTCLKALSGAVSCIDIILHESLLSAIFKMSLWDYGPNVMDALIELIISLAVSSGN
YVDSCLDMLVNNFMPPYSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLEQI
VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ
DDFSKGIFEMELEDDDETADDSNEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES
CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALYPEVCGERFAVSLADMFVS
CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTSILKRLVDWCLEYGKTLDVEPNPKAHKVF
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAK
VANLFTPSETYVFNGLLESDYSRTFGGIERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR
PTYDEEEGDGGSSDEDVAEVFPDRIEENLMDDEAMARSYDDQDFDLDEFDSALNNMSITP
RNSLQYRRDFVQMPSRIRPSMSPESF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagaattcgaaaatggtcaagctcagttgcacgatatggaggatgttaatctc
acagatgcccagttagttgatttcatcagggggtttcttagttcagtgtcgctgggagat
aatgatgggtataaccagcttattggtgttatacaccacaaggatcgactatccccagat
gagattgccttgcttgtgacatgtttgaaggcactatctggagcagtttcttgtatagat
atcattctccatgaatctcttctttcagcaatttttaaaatgagcttgtgggattatgga
cctaacgtaatggatgccctgattgaactaataatatccctggctgtttcaagtggaaat
tatgtggattcgtgcttggatatgcttgtaaataatttcatgccgccctattcctacaag
gatttcctgaagaaaccacatggccttactagaaaggatgaagttctttctcgagtgcac
acagctttaaaagacatctcagacttggtgcctcttgcacccttgagattagagcagata
gttgtccataaaatgcagagagtctttttcaaagaatctttgaccacgatatatgtggaa
aacatgttgaggttggaaaagggtgcaatgagtgaatttgttgggagaaagatcttaact
gcgctggtggataagcttttagatttggatgtggagattgggtgggatgatatcctacaa
gacgatttcagtaaaggaatttttgagatggaacttgaagatgatgatgaaactgcagat
gatagtaatgaggattctagtgagcttccaagagaactaagtcgtaagagcttaggtgga
aatgtaattgctgaaacgttagatagcttgattgttctaacatttgaacatcttgaatca
tgtgaacgtgatggacgattgaatgaggtttttgacattttactcctgtcattccaaaga
actgttctgactgcttacaagtctaaatttgcccagtttgtcatattctatgcttgtgca
ttatatccggaagtttgtggtgagagatttgccgtttcactagcagatatgtttgtttcc
tgcaatgatcctccgcttaccaggatgagtgctgtttcatatcttgcgagttatttgtct
cgcgggaagtttttgtcaacctctttggttacttctatattgaaaagattggtggattgg
tgtttagaatatggcaaaacactcgatgttgagccgaacccaaaggctcataaagtattt
tattctggttgccaggccataatgtatgtgctttgcttccggatgaggtccattttggag
attccacgcctgaagtcacaacttcttcttatgcctataggtccagtcttgacacataga
ttaagcccactgaaggtttgcctaccatctattgttgaggaatttcttcggcaggcaaaa
gttgctaatttatttacgccatcagagacttatgtattcaatggtttgctggagtctgac
tattcaagaacttttggtgggatagaaaggctcgacatgttttttccgtttgatccttgc
ttattgaaaaaatgtgacagatacctacggccacatttcgtatattggtcgatggtcaga
cctacctatgatgaagaagaaggagatggaggtagcagcgatgaagatgttgcagaggtt
tttccagatagaatcgaggaaaaccttatggacgatgaagcaatggcaagaagctacgac
gaccaggattttgatcttgatgaatttgattctgcattaaacaatatgtccatcacacca
agaaattctcttcagtaccggcgagattttgttcaaatgccctcgcgaatccgaccctcg
atgagtccagaatctttttga
DBGET
integrated database retrieval system
