Benincasa hispida (wax gourd): 120085323
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Entry
120085323 CDS
T07258
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120085323
Membrane trafficking [BR:
bhj04131
]
Protein recycling
Others
EARP complex
120085323
Endosome - Golgi transport
Tethering complex
GARP complex
120085323
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
COG7
Vps54_N
XhlA
HemX
COG5_N
FUSC
MPH2
RecG_N
Motif
Other DBs
NCBI-GeneID:
120085323
NCBI-ProteinID:
XP_038897182
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Position
9:90943608..90997235
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AA seq
823 aa
AA seq
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MDKSSALEYINQMFPTEASLSGVEPLMQKIHNEIRRVDAGILAAVRQQSSSGTKAKEDLA
AATSAVEELMSKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDNPKITELREKFKNIKQILKSHVFSD
FSSLGTGKEKEETNLLQQLSDACFVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPPSWHVPYRLCIQFCKKTRKQLEDILDNLKEKPDV
ATLLLALQRTLEFEDELAEKFGGGARGKESGNEIEEFGREDSNSQNVSDIRKKYEKKLAV
HQGPENDEKNGIKDMPVPGAGFNFRGIVSSCFEPHLTVYIELEEKTLMENLEKLVQEETW
DIDEGSQSNVLSSSMQLFLIIKRSLKRCSALTKNQTLLNLFKVFQRVLKAYANKLFARLP
KGGTGFVAAATGMDGQIKTSDKDEKVICYIVNSAEYCHKTSGELAESVQKIIDSQLVDAV
DMSEVQDEFSAVITKALVTLVHGLETKFDSEMAAMTRVPWGTLESVGDQSEYVNGINMIL
TTSIPVLGRLLSPLYFQFFLDKLASSLGPRFYANIFKCKQISETGAQQMLLDTQAVKTIL
LDIPSLGRQTSGATSYSKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRI
LELKGFKKADQQSILDDFNKHGPGITQPSVSSPSAPPVVSSTPPAPTVTSPSTVGLMASR
EDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagcgctttggaatacattaaccagatgttccccacagaggcatcttta
tctggtgtggagccacttatgcaaaagatacataatgagatacgtcgtgtagatgctgga
attttagcagctgttcgccaacagagtagttcagggaccaaagcaaaagaagatcttgct
gctgctacatcagctgtagaggaactcatgtccaaaatccgggaaataaaaactaaagct
gaacagagtgagacaatggttcaagagatttgtcgtgatattaagaagttggactttgca
aagaaacatattacaacaacaataactgctcttcatcgtctgaccatgttggtctcagct
gttgagcagctccaagtaatggcttcaaaacgacaatacaaagaggcagctgcacagttg
gaggcagtaaaccaattatgtagtcattttgaagcctatagggataacccgaagatcaca
gagcttagggagaagttcaagaatattaaacaaattctgaaatcgcatgtattctctgac
ttctcaagcttaggtactgggaaagagaaagaagaaactaatttactgcagcaattgtct
gatgcttgctttgtcgttgatgctctggagccatctgtgagggaagagttggtgaataat
ttttgcagccgggagctcacttcttatgaacagatatttgaaggagcagaattggcgaag
ttagataaaactgaacgaagatatgcatggataaagcgtcgtataagaacaaatgaagag
atatggaaaatttttcctccttcgtggcatgtcccatatcgtctttgtatccagttctgt
aaaaaaacaagaaaacaacttgaggacatcctggataatttgaaagaaaagccagatgtt
gcaacattattgctggcactacaacgaactttggaatttgaagacgaactggcagaaaag
tttggaggaggtgctcgagggaaggagagtggaaatgaaattgaagaatttggtagagag
gatagtaatagtcaaaatgtttccgacatcagaaaaaagtatgagaagaagctggccgta
catcaaggaccagagaatgatgaaaagaatggaatcaaagatatgccggtgcctggagct
gggttcaacttccgtggaattgtctcttcttgctttgaaccgcacttgacggtgtacata
gaactagaagagaagacattaatggagaatctggaaaaacttgttcaggaagaaacatgg
gacattgatgaaggaagtcagagcaatgttttatcaagtagcatgcagttgtttctaata
atcaaaaggagcttaaagaggtgtagtgccttgactaagaaccagacattattaaatttg
ttcaaggtattccaaagagtgctaaaagcttatgctaacaaactttttgcaagacttccc
aagggtggcacgggatttgttgcagcagccactggcatggatggacaaataaagacttct
gacaaggatgaaaaagttatctgttacatagtcaattcagctgaatattgccacaagact
tctggtgaattggctgaaagtgtgcaaaagataattgattctcaactagtggatgcggta
gatatgtcagaggtgcaggatgaattctcggcagtaataacaaaagcgttggtcaccttg
gtgcatggtctggaaactaaatttgattcagaaatggcagcaatgactcgcgttccatgg
ggtactcttgaaagtgttggtgatcaatcagagtatgtcaatggcattaatatgattctc
acaaccagcattcccgtacttggcagacttctttcacctctttacttccagttcttcttg
gacaagcttgcatcatctcttggtccgcgcttctatgccaacatcttcaagtgcaagcaa
atatcagaaacgggagcccaacaaatgttgttggacactcaagctgtgaaaacaattctt
cttgacattccttcccttggtcgacagacttcaggtgccactagctattcaaaatttgta
agtcgtgagatgagcaaagctgaagctcttttaaaggttatactttcccccatcgattct
gtggcagatacgtatcgtgctctactgccggaaggaaccccgatggagttccagcgaatt
ctggaacttaagggatttaagaaagctgatcagcaaagcatactggatgatttcaacaaa
cacggaccagggatcacgcagccttcagtttcatcaccttcggctccacctgttgtctcc
agcacccctccagctcctacagttaccagtccttctacagtcgggcttatggcatccagg
gaggatgtccttactcgagcagctgcgctaggacgaggagctgccactactggattcaaa
agattcttggctcttactgaagctgcaaaagacaggaaagatggacctttcagaaaactt
ttcaacccttga
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