Benincasa hispida (wax gourd): 120085342
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Entry
120085342 CDS
T07258
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120085342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120085342
03036 Chromosome and associated proteins [BR:
bhj03036
]
120085342
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120085342
Coactivators
SAGA/TFTC/STAGA complex
120085342
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120085342
STAGA complex
120085342
TFTC complex
120085342
SAGA complex
120085342
SLIK complex
120085342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
120085342
NCBI-ProteinID:
XP_038897210
LinkDB
All DBs
Position
9:complement(6956660..6962779)
Genome browser
AA seq
681 aa
AA seq
DB search
MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ
SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQQQ
QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQFGMMRQQSALYGQM
NFGGPSTNQQQQQQQQPNQQQQMGTGNLSRSALIGQGNHLPMLSGTAQYNLQSQLLASSK
QKAGLVQGPQFQSSNSHGQALQGIQAMGMIGSMNLTSQLRANGLASSYTQQRINQGQIRQ
QLSQQSSLTSPQVQNLPRMANLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMSTP
GSPSFRLQQRQQALLQQQLASSSQLHPNNMSLNPQQFPQLVQQQSSMGHQQLHQQHQQQQ
QQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAALAGQKSLSL
TGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEIA
DDFIDSVTTFSSNLAKHRKSSTLESKDLLLHLVLDKALPIINCGRAEKNWQLNVPGYSSD
EWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNINSPKEMVRQGVGMSIGTNTLTRPSP
SSEQLLSQTAGSQLLQQMMRF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtacttcgtcgccaagaccggttcaaccgaatccgatggacccttcccca
ccgccgccgcagcaacaaccgcaagttcaaccttcaaccaccgctattccacaaaattca
tcaaatccatcaaattcctctgtaaatcctcccattccatcgccttctgcgcttgctcaa
tctccttcgattgaccacttacattcgctatctcaaatctcttctcctcctctttcgcac
atctctctcccgcaaaatcaacagcaacaacaacagctgagtcctgcggttggattggat
taccagcaaaaacctctgcagcagcagcagcagcagcagcaacaacaacaacaacagcaa
cagcaacattcacagcaattggtgcaacaacctcagaatgcgagtgcgatgacgaatttc
caaatccagcaggctttacagcggtccccatcaatgtctcggttgaaccaaatgcaacca
cagcagcagcagcagcagtttgggatgatgagacagcaatcagcactttacggtcagatg
aattttggtgggccttctacaaaccagcagcagcaacagcagcaacagccgaaccaacaa
cagcaaatgggaactgggaatctgtcgcggtctgcattaattggtcagggaaaccatttg
cccatgttgtctggaacggctcagtataatttgcagtcacaattactggcttcgtcgaag
cagaaagctgggttagtccagggtccgcaatttcagtcgagtaactctcatgggcaagct
ttgcaaggaattcaagcaatggggatgattgggtcaatgaatttgacctcacagctaaga
gctaatggccttgcttcgtcatatacccaacagagaataaaccaaggtcaaataaggcag
caattatctcaacaaagttcgctcacgtctccacaggttcagaacttaccgagaatggca
aatcttgcttttatgaatcaacaattgaccaatttggctcagaatgggcagccaaccatg
atgcagaactctttgcaacagcaacagtggctgaagcaaatgccatcaatgtctacccct
ggctcaccttcatttcgtcttcaacagaggcaacaagccctgttacagcagcaactggct
tcatctagtcaattgcatccaaacaacatgtccttgaaccctcaacagtttcctcagctt
gtacagcaacagtcgtccatgggacatcaacagctgcatcaacagcatcaacagcaacag
cagcaacctcagtcacaacaacagcaaccacagcaacagctacaacagcagccacttcat
caacaacagcagctacttcaacaagcatcaccacagcaatcactgcaaccagtattgcat
cagcatcagcagcattctcctaggatagctgcacttgcgggccagaaatctctcagtttg
actggatcacatccagatgccacagcatctggcgctagtacacctgggggaagttcaagc
caagggacagaggctgccactcaagtccttgggaagagaaagatacaagatctggtttca
caggtagacccacatggaaagctggaacctgaagttgaagatcttctcttggagattgcc
gatgattttattgattcggttactaccttttcaagcaatctggctaaacaccgaaaatcc
tcaactttagaatccaaagatctattgctgcacttagtattagacaaagctttaccaatc
ataaattgtggacgtgcagagaagaattggcagttgaacgttcctggatattcaagtgac
gagtggaagaaccacaacaaaaatttatcatcaagtgatgttcacaagaaacgtctggac
atgatacgcatattgaaggaagcctcccgtgtcgaaacaaacataaacagccctaaagaa
atggtacgacaaggggttggaatgtccattggtaccaacactctaacaaggccttcacca
agttcagaacaactattgtcacaaacggccggttcacagctgctgcagcaaatgatgagg
ttttaa
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