Benincasa hispida (wax gourd): 120085530
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Entry
120085530 CDS
T07258
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like isoform X1
KO
K03253
translation initiation factor 3 subunit B
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120085530
03012 Translation factors [BR:
bhj03012
]
120085530
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120085530
Translation factors [BR:
bhj03012
]
Eukaryotic type
Initiation factors
eIF-3
120085530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
IKI3
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
120085530
NCBI-ProteinID:
XP_038897475
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All DBs
Position
9:42865392..42870587
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AA seq
719 aa
AA seq
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MADVMLMKEIEETAGRLGIDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGN
IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDPTTQKTLGYCFIEYGTPQ
EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEISPYTPGENLQQWLTDEK
ARDQFVIRSGSDTEVFWNDARHLKPEPVYKRQFWTESFVQWSSLGTYLATIHRQGAAVWG
GAGTFNRLMRFAHQQVKLIDFSPGEKYLVTYSSHEPSNPRDANRIVINIFDVRTGKVMRD
FKGSPDDFAIGGTGGVAGVSWPVFRWGGGKDDKYFARIGKNVISVYETETFSLIDKKSLK
VENVMDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQS
NGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFA
VIHGDNPRPDISFYSMRSSTHNSGRVSKLTTLKGKQANALFWSPAGRFIILAGLKGFNGQ
LEFYNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRIL
KDHFFQFAWRPRPPSFLGPEKEEEIAKNLKKYSKKYEAEDQDVSMLLSEQEREKRRMLKD
EWDKWVNEWKRLHEEEKLLRQKLRDGEASDEEEEYEAKEVEVEEILDVSEEVLSFDFGQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgatgctgatgaaggagattgaggaaacggctggtcggcttgggatagat
ctctcccaagttgattttgacgctattcgtctccctcctggcgaggatttcggaatcatt
agtgatgatgaagaggttctacaagaggagagtctagagtttgattctgggtttggaaac
attatagttgttgacaatcttccggttgttcctccggagaagtttgagaagctcgaaggt
gttgttcgtaaaatttttggacagattggagtaattaaggatgatggtttgtggatgcct
gttgaccctactacacagaaaactttaggttactgctttattgagtacggcaccccacag
gaggctgagcttgctaaagagaaaactgatgggtacaagttggatagagcacatattttc
actgttaacatgtttgaggacttcgacagatttatgaaagtcccagatgagtgggcccct
cctgaaattagcccatatactcctggggagaatcttcaacagtggctaactgatgaaaaa
gcacgggatcagtttgttatccgatctggttccgatactgaggttttctggaatgatgct
agacatttgaagcctgagcctgtttacaagcgtcaattctggaccgagagttttgttcag
tggtcctcattggggacttacctagcaacaattcaccgacagggtgctgcagtttggggt
ggagcaggtacctttaaccgtctgatgcgctttgcccatcaacaggttaagttaattgat
ttttctcctggtgagaaatatttggtgacgtacagcagtcatgagcccagcaatccccgt
gatgcaaataggattgtgatcaatatttttgatgtaagaactggaaaagtaatgagagat
tttaagggaagtcctgatgattttgccattggaggaactggtggtgttgctggggtatct
tggcctgtttttaggtggggtggtggaaaagatgataaatactttgccaggattgggaag
aatgtgatttcagtctatgaaacagagactttctcccttattgacaaaaagtctttgaag
gttgaaaatgtaatggatttctgctggtcccctacagatcccattattgcactgtttgtt
cctgagctaggtggtgggaaccaaccggctagggtgagtcttgtccaaatccccagcaag
gaggagttgaggcagaaaaatcttttcagcgttagcgattgtaaaatgtactggcaaagc
aatggggattatcttgctgtcaaggttgatagatatacaaagacgaagaaaagcacatac
acagggtttgagcttttccgcataaaagagcgggatattcccattgaagtgctggagctt
gagaataagaatgacaagatcattgcctttgcctgggagccaaaggggcacaggtttgca
gttattcatggtgacaacccaaggccagatattagcttttactctatgcgaagcagcact
cacaacagtggccgagtgtcaaaacttacaactctcaaaggcaagcaggccaatgctctt
ttctggtcacctgctggacgattcattattcttgctggtttgaaaggtttcaacggacag
ttggaattctacaatgttgatgagctggagacgatggcgaccgcagagcatttcatggct
actgatattgaatgggatcctaccggaaggtatgttgcaactgctgtaacttcagtccat
gagatggaaaatggtttcaacatatggtccttcaatggaaaactactctatcgaatcttg
aaggatcatttctttcagtttgcatggcggccaaggccaccatccttcttgggtccagaa
aaagaggaagagatagcaaagaatttgaagaagtacagcaagaagtacgaggctgaagat
caggatgtatctatgctacttagcgagcaggagcgtgagaaacggagaatgttgaaggat
gagtgggacaagtgggtgaatgaatggaagagattgcacgaagaagagaagttgttgcgg
cagaagctgcgggatggcgaagccagcgacgaagaagaggaatacgaagccaaagaggtt
gaagtcgaagagattttggatgtgtcggaggaagttttgtcctttgattttgggcagtaa
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