Benincasa hispida (wax gourd): 120085578
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Entry
120085578 CDS
T07258
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
bhj
Benincasa hispida (wax gourd)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_25
AAA_14
AAA_7
RuvB_N
IstB_IS21
NBD_SMAX1
NACHT
Zeta_toxin
TIP49
Torsin
Rad17
Motif
Other DBs
NCBI-GeneID:
120085578
NCBI-ProteinID:
XP_038897556
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All DBs
Position
9:50784131..50794577
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AA seq
959 aa
AA seq
DB search
MLATPSSSSMNQTSVLDCHKQTHVHGCNRLISPASVSSSTCSLSVFSSSHLFGRRISGFP
SSNLVSSFSPSFLTSRNGFISGRIRRKRRLRIPVISAIFERFTERAIKAVIFSQREAKAL
SKDLVFTQHLLLGLIAEEEHNQSPGGFLDSGLTLDVARQAVRGIWHNNDADADTSVDGAA
VTAHVPFSISTKRVFDSAVEYSKQMGHHFIGPEHLSIALLAADDDGSIQLILRSLGVNVT
QLVDAAMSRLKGELAKDGREPSSALQWVPKKSTSKKALSMKLSQKEKENTALARFCVDLT
ARASEGFIDPIFGRDSEIERVVEILCRRTKNNPILIGESGVGKTAIAEGLALSIAQADAP
FVLLNKRVMSLDIGLLMSGAKERGELEARVTALINEITESGNIILFIDEVHSLAELGASG
GGSKGSGLNFANLLKPSLGRGKLQCIASTTIGEYTKQFEKDKALARRFQPVLIEEPSQEN
AVRMLMSIREKYEAHHNCRFTLEAINAAVYLSARYISDRYLPDKAIDLIDEAGSRARMEA
YKKKKELQTSILSKSPDDYWHEIKAIQAMHDMNLANKLDDGGVQSSDSSGNDVLESTFSS
ISDNYEPVVVGPDDVAAVTSLWSGIPVQQLTIDESILLMGLDEQLKKRVVGQDEAVSAIS
RAVKRSRVGLKDPDRPIAVLLFCGPTGVGKTELTKVLARCYFGSEAAMLRLDMSEYMERH
SVSKLIGSPPGYLGYGDGGTLTEAIRRKPFTVVLLDEIEKAHPDVFNIVLQLFEDGHLTD
SQGRRVSFKNALIVMTSNIGSTSIIKGRHRSVGGFFTSEDESSSSYAGMKSLVTEELKGY
FRPELLNRIDEIVVFQPLQKTQMLEILNLMLQEIKERLMPLGIGLELSESVMDLICQVGY
DKAYGARPLRRAVTMIVEDPLSEALLYEDPKPGDTFVIDLDPTGNPFVKNQSNTAFPLV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgaccccatcttccagttctatgaatcaaacttcggtgcttgattgccataaa
cagacccatgttcatggttgcaatcgattgatctctccggcttctgtttcttcttccact
tgttcgctgagtgttttttccagttcccatttgtttggacggcgaattagtggattccca
tcttccaatcttgtatcctcgttttccccttcttttctcacatccagaaatggtttcatc
agcggtagaatccggcggaagaggcggttgaggattccggtcatttctgccatttttgag
cgatttacggaacgagcgattaaggcagtgatcttttcgcagagagaggcaaaagccctt
tcgaaggatttggtttttacccaacatcttcttctgggtttgattgctgaggaagagcac
aatcagtctcctggcggttttctggactcgggccttacacttgatgtggcacgccaggcc
gttcgtgggatttggcataacaatgatgcggatgccgataccagtgttgatggtgcggct
gttacggctcatgtccctttttctatcagcactaagcgtgtgtttgattccgctgttgaa
tattccaagcaaatgggccatcatttcattggaccggaacacctttccattgctttactt
gctgctgatgacgatggaagcatacagttgattttgaggagcttaggggtaaatgttaca
cagttggtagatgcagcaatgtccaggcttaaaggggagcttgccaaggatggtagggag
ccatctagtgcattgcaatgggtgcctaaaaaatccacttctaaaaaagctctttctatg
aaactctctcaaaaagaaaaagagaatactgctttggctcggttctgtgtggatcttact
gctcgtgctagtgaaggattcattgaccctatttttggtcgagattctgaaattgaacga
gttgtggagatactttgtcgtagaacaaaaaacaaccccattcttattggtgagagtgga
gtaggaaagacagcaattgctgaagggttggctctcagtattgctcaggcagatgctcca
ttcgtactgttgaacaaacgggtaatgtccttggatattggactactcatgtctggtgca
aaggaaaggggggaattggaggcacgcgttactgcactaattaacgagataactgaatca
ggcaatattatcctttttattgatgaagtccattcacttgctgagcttggtgcaagtgga
ggtggaagtaaagggtctggtcttaacttcgctaatttattgaaaccgtctcttgggaga
ggaaaactacagtgtattgcttccaccacaattggcgaatacacaaagcaatttgagaag
gataaagcattagcacgacgattccagcctgtgctgattgaggagcctagccaggagaac
gcagtgagaatgttgatgagcattcgtgagaagtacgaagctcaccacaactgcaggttt
acgcttgaagcaataaatgctgctgtgtatctgtctgcaagatacataagtgataggtat
cttccagataaggcaatcgatctcattgacgaagcaggtagtagagctcgtatggaagcc
tataagaagaaaaaggaattgcagacttctatactctctaaatcaccggatgattattgg
cacgaaattaaggctattcaggctatgcatgacatgaacctggccaataaactcgatgat
ggtggagtacaaagctcggattcttctgggaatgacgtcttggagtccactttctcttca
atatcggataattatgaacctgtggtggtgggaccagatgatgtcgcagcagttacttct
ctttggtcaggcatcccagttcagcagctaacaattgatgagagcattcttttgatgggt
cttgacgaacagctcaaaaagcgagttgttgggcaagatgaagctgtttctgcaatttct
cgcgctgttaaacggtctcgggttgggcttaaggatcccgaccgaccaatagcggtccta
cttttttgtggccctactggagttggcaagactgaactaacaaaagttctggcaaggtgc
tactttggatcggaagcagctatgctgagattggacatgagtgaatatatggagcgacat
tctgtgagtaaactgattggatcacctccaggatatcttggctatggagacggaggaaca
ttaacagaagcaataagacggaagccatttacagtggtattgcttgacgaaatagagaaa
gctcatccggatgttttcaacatcgtactgcagttgtttgaagatggacaccttacagat
tctcagggacggagagtgtcgtttaagaatgcattgatagtaatgacatcaaacatcggt
tcaacttcaatcataaagggtagacatcgctccgtcggtggtttctttacttcagaagat
gagtcatcgagttcatatgcaggaatgaaatctcttgtgacagaggaactcaaggggtat
tttcgtcccgagttgctgaaccggatagacgaaatagtcgtgttccaaccccttcaaaag
actcagatgctcgagatcttaaatctgatgcttcaagaaataaaggagagacttatgcca
ctcgggattggcctagaattatcagaatcggtaatggatctcatatgtcaagtagggtat
gacaaagcttatggtgcaagacctcttaggagagctgttactatgatagttgaagaccct
ttaagtgaggcattgctttatgaagatccaaaacctggtgatacttttgttattgatttg
gatcctacagggaacccgtttgtcaaaaaccaatccaatactgcatttccacttgtttga
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