Benincasa hispida (wax gourd): 120085589
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Entry
120085589 CDS
T07258
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120085589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhj03009
]
120085589
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Pre-60S particles
GTPases
120085589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
120085589
NCBI-ProteinID:
XP_038897573
LinkDB
All DBs
Position
9:complement(43625829..43629709)
Genome browser
AA seq
1037 aa
AA seq
DB search
MGDLETQRIRNICILAHVDHGKTTLADHLIAASGGGLIHPKMAGRLRFMDYLDEEQRRAI
TMKSSSIGLRYKEYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLICELKLSPMEAYTRLLRIVHEVNGIMSAYKSEKYLSDVDSI
LAGSSGDVNDENLEFVEDDEEDTFQPQKGNVVFVCALDGWGFGINEFAEFYASKLGANVS
ALKKALWGPRYFNPKTKMIVGKKAMAGGSKARPMFVQFVLERLWEVYGAALETDGNKEVL
QKVNSTFNLNIPARELSNKDPKVVLQAIMSHWLPLSDAILSMVVNCMPDPITAQSFRISR
LLPKRDIVDTGVDINVLTEAALVKKSIEACDSRPEAPFVAFVSKMFAVPVKMLPRRENYG
ESTNISAEDGGDGESDECFLAFARVFSGVLYSGQRVFVLSALYDPTKGESMHKHIQEAEL
HSFYLMMGQGLKPVTSVKAGNLVAIRGLSHHILKSATLSSTRNCWPFSSMAFQVAPTLRV
ALEPSDPGDIGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKDRFAR
VSLEVSPPLVSYKETIEGEASSVLDYFKVLSESTDCVTKKTPNGRCTVRVQVLKLPPDLA
KVLDENSDVLGDIVGVKLGQNYKNLETKRSSMRENENLMEVVKKLIADATCSDISSKDDH
ESSRADKHNALWSKLLKRIWALGPQQIGPNILINPDPKVKDPDCSVLIRGSPYASQRLGF
VDDSLNGNLDPETSLEDDTSSAASPEGTQTLCMEAASLENSVLSGFQLATSAGPLCDEPM
WGLAFIVEASISSLSGNSDEFESPFQPENNAIFSGQVMAAVKDACRAAVLQKKPRLVEAM
YFCELNTPTEYLGPMYAVLARRRARVLKEEMQEGSSLFTVHAYVPVSESFGFADELRRWT
SGAASALLVLSHWEELCEDPFFIPKTEEEIEEFGDGSSVLPNTARKLIDTVRRRKGLPVE
EKVVQHATKQRTLARKV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatctcgaaactcaaagaattagaaacatatgtatattagcacacgtcgatcat
ggcaaaacgacacttgccgaccatcttatcgccgcctcggggggtggtttgatccaccca
aagatggcgggccgccttcgtttcatggattatcttgatgaggaacaaaggcgggcgatt
actatgaagagctcttcgattggtttaaggtacaaggaatactctatcaatctcattgat
tcgcctggccatatggatttttgtagtgaagtgtcgactgctgctagattgagtgatggg
gcattggttttagttgatgctgtggagggtgtgcacattcaaacccatgccgttttacga
caggcttggattgagaagcttacgccgtgtttggttcttaataagattgataggttgata
tgtgagttgaagttgagtcctatggaagcgtatactcgtttgttgaggattgttcatgaa
gttaatgggataatgagtgcatacaagtccgagaaatatttgtccgatgtggattcaata
cttgcaggttcttcaggtgatgtaaatgacgagaaccttgagtttgttgaggatgacgaa
gaagatacatttcaaccacagaaagggaatgtggtgtttgtgtgtgctttagatgggtgg
ggttttggaattaatgagtttgcggagttttatgcttcaaagcttggggccaatgtatcg
gcattgaagaaggcgttgtggggtccacggtattttaatccaaagaccaagatgatcgtt
ggaaagaaggccatggctggaggaagtaaagctcggcctatgtttgtacaatttgtgctt
gaaagactttgggaagtttatggggctgctttagaaactgatgggaataaggaggtactt
caaaaggttaatagtacatttaatttgaatataccagctcgagaactttcgaacaaggat
ccgaaggtggttcttcaagctattatgagtcattggcttcctctttcagatgcaatattg
tcaatggttgtaaactgtatgcctgacccaattactgcccaatcatttcgaatatcacgg
ttgcttccaaagagggatatagttgatactggagttgacatcaatgtactaactgaagca
gctcttgttaagaaatccattgaagcttgtgattcgaggcctgaagctccatttgttgct
tttgtgtctaagatgtttgcagttccagttaaaatgcttccacggagggaaaactatggt
gagagtactaatatttcagctgaagatggtggagatggtgaatcagatgagtgctttctt
gcatttgcaagggtatttagtggggttctttattctggacagagagtttttgtgctttca
gctttatatgacccgacaaaaggggaatcaatgcacaagcacattcaggaggctgaattg
cattcattttatctaatgatgggccaaggcttgaaaccagtgacctcagtaaaagcagga
aaccttgtagcaattcgtggtcttagccatcacatattgaaaagtgcaactctttcatcc
acaagaaattgctggcctttctcaagtatggcattccaggttgctcctactcttagagtt
gcacttgagccatctgatcctggagatataggtgcattgttgaaaggcttaaggctttta
aatcgagcggacccttttgtagaggtaactgtttcagcaaggggagagcatgtacttgct
gcagcaggagaagttcatctcgagagatgcataaaggatttgaaggataggtttgccagg
gtaagcttggaagtctctccacctcttgtatcgtataaagagacgattgaaggagaggct
tctagcgtgttggactattttaaggtgttgtccgaaagcacagactgtgttactaagaaa
accccaaatggtagatgtaccgtcagagtgcaggtactgaaacttccacctgatcttgct
aaagtacttgatgaaaattctgacgtattgggagatattgttggagtcaaattggggcag
aactataaaaacttggaaacaaagagatcaagtatgagggaaaatgagaatttaatggaa
gtagtaaaaaaactaatagcagatgcaacatgtagtgatatatcttcaaaggatgaccat
gaaagcagtcgggctgacaaacacaatgcactatggtcgaaacttcttaagcgaatttgg
gcacttggaccacagcagattggtcctaacattctgattaatccagatcccaaagtaaag
gatcctgattgttctgttcttattcggggctcaccttatgcatcacagagattgggtttt
gtggacgattccttaaatggtaacttggatcctgaaacatcgttggaagatgatacatct
tctgcagcatcaccggaaggaactcagacactatgcatggaagcagcatctctcgagaac
agtgttctatctgggtttcagctcgctacatcagctgggcccttatgtgatgaacctatg
tgggggttggcatttattgttgaagcctctatttcttcattgtctgggaattcagatgaa
tttgaatctccctttcaaccagagaacaatgctatcttttctggtcaagttatggccgct
gtaaaggatgcctgtagagcagctgtacttcaaaagaaaccacggcttgttgaagccatg
tacttctgtgaattgaatactcccactgagtatttgggtccaatgtatgctgtacttgca
cgaaggcgagccagagttttgaaagaagaaatgcaggaaggttcatctttgtttactgtg
catgcatatgtgcccgtttcagaaagctttggttttgcagatgaattaaggagatggact
tctggagcagcaagtgctcttctagttcttagccattgggaagaattatgtgaagatcct
ttttttatccccaagacggaagaagaaatagaagagtttggagatggttcaagcgtgctt
cctaacacagcaagaaagctcattgatactgtaagacggcgcaagggtcttccagtggaa
gaaaaagttgtacaacatgcaacaaagcagagaactttggcccggaaagtataa
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