KEGG   Benincasa hispida (wax gourd): 120085620
Entry
120085620         CDS       T07258                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120085620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhj03021]
    120085620
   03036 Chromosome and associated proteins [BR:bhj03036]
    120085620
Transcription machinery [BR:bhj03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120085620
Chromosome and associated proteins [BR:bhj03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    120085620
   PBAF complex
    120085620
   GBAF(ncBAF) complex
    120085620
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 ZZ IBB
Other DBs
NCBI-GeneID: 120085620
NCBI-ProteinID: XP_038897629
LinkDB
Position
9:72487120..72493757
AA seq 805 aa
MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYNSNGTNRHDDDDEDEDLVAAENEEMERDNN
DDSEDPQISLHPAPNSAIQETELLSDDKVRVSEFPQVVKRAVTRPHSSVMAVVAMERTNQ
YGESKGMPGNSLILENVSYGQLQALSAMPADSPALLDQERAEAGNAAYVVTPPPIMEGRG
VVKTFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYM
ENPEKRVTVSDCQGLVDGVSNDDLTRIVRFLDHWGIINYCAPTPSCEAWNSSSYLREDMN
GEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCHDDIDGLSDLDNRIRERLAENHC
SSCSLSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYELDSENWTDQ
ETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLSSNSS
HGEDKEKSRSNMNGNMAGSSSQDNKEIHDRLPFANSGNPVMALVAFLASAIGPRVAASCA
HASLAALSEDSVASSGSIFQMEGSVNANRTNVDVKQIRDGGSHGELPNSDKKDENKAETE
ATVLSSERVKDAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEV
ETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPVSLPGVIPSMVVNNSNTNSRPN
MISPPASQPSVSGYSNNQPLHPHMSYMPRQPMFGLGQRLPLSAIQQQPPPPSTSSNAMFN
GPSNAQPSLSHPMMRPVTGSSSGLG
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgccaccttccccttccttcccatctgggtctcgtggaaaatggcggaaaaagaagagg
gattcgcaaattggccgcagaaacaactataatagcaacggtaccaacagacatgatgac
gacgatgaagatgaagaccttgttgctgctgaaaatgaggaaatggaacgcgataacaac
gatgattctgaggaccctcagattagtcttcaccccgcgccaaattccgccattcaggag
actgaacttctgtcggatgataaagtgcgagtctctgagtttcctcaggtcgttaagcgg
gctgtcactcggcctcactcttctgtgatggccgttgtggcaatggagaggacaaatcag
tacggagagagtaagggcatgcctggaaattccttgattttggagaatgtgtcttatggg
caactccaggcactgtctgctatgccggcggatagtccggctttgctggatcaggagagg
gcggaggctgggaatgctgcgtatgttgtaactccaccgccgattatggaagggcgtggc
gtggttaagacgtttgggagtagggtgcatgttgtccctatgcactcagattggttttca
cccgccacggtgcatcgacttgagagacaagttgttccacattttttctctgggaaattg
cctgaccgcactcctgaaaagtatatggagattcgaaattttgttgttgccaaatacatg
gagaatcctgagaaaagggtcacagtttcagactgccaagggttggttgatggtgtcagt
aatgatgatttaactcgaattgttcgatttcttgatcattggggtattattaattattgt
gctcctacacctagctgtgaagcatggaatagcagttcatacttgagagaagatatgaac
ggtgagattcatgtgccatcagctgctttgaagcctattgatagcttggtcaaatttgac
aaaccaaagtgtaggctcaaggcagctgatgtatattcggcacttccatgccacgatgac
attgatggtttgtctgatttggataacagaattcgagagcgtctagctgaaaatcattgt
agctcttgttctctgtctgttcccattgcgtactaccaatcacagaaggaggttgatgtt
ttgctttgctctgattgcttccatgaaggcaaatacgttgctggccattcaagcattgat
tttctgagggtggacatggcgaaagattatgaactagatagtgaaaattggaccgatcaa
gaaactctattgcttttagaggcaatagaattgtataatgagaattggaatgaaattact
gaacacgttgggtccaagtctaaagctcaatgcattatacattttcttcgtctatcagtg
gaggatggccttctagaaaatgttgatgtgcctggggtttctctctcgtcaaattcgtca
catggagaagataaggagaagtcacgttcaaatatgaacgggaacatggcaggatcctcc
tctcaagataataaagagatacatgataggctcccctttgccaattctgggaacccagtc
atggcgttggttgctttcctcgcatctgctattggaccaagagttgctgcatcttgtgct
catgcatccttagctgcattatctgaggacagtgtagcttcctccgggagcatctttcaa
atggaaggttctgtaaatgctaataggacgaatgtggacgtcaaacaaatcagagatggt
ggctcccatggagaacttccaaattcagataaaaaagatgagaacaaggcagagacagaa
gcaacagtattatcttctgaaagagttaaagatgcagcaaaagcaggccttgctgccgct
gcaacaaaggcaaaattgtttgctgatcatgaagaacgagaaatccaacgattatctgct
aatattataaatcatcagttaaaaagactggagctgaagctgaagcagtttgcagaagta
gaaaccttcttgatgaaggaatgcgaacaagttgagaggacaaggcagaggtttgtcgca
gagcgagcaagaatgttaggtgtccaatttggacctgctggagttacgccacctgtgagt
ttaccaggcgttatcccttcgatggtagtaaacaacagtaacacaaacagtaggccgaat
atgatctcacctccagcttcacagccgagcgtttcggggtatagcaacaaccaaccactt
cacccccacatgtcatacatgccccgacaaccaatgtttggtttgggacaaaggctaccc
ttatcggcaattcagcagcagccgccgccgccctcaacttcttctaatgccatgtttaat
ggtccaagcaatgcacaaccttctctcagtcacccaatgatgaggccagttactggatcc
agctctggattaggctga

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