KEGG   Benincasa hispida (wax gourd): 120085698
Entry
120085698         CDS       T07258                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120085698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhj03021]
    120085698
Enzymes [BR:bhj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     120085698
Transcription machinery [BR:bhj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     120085698
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 120085698
NCBI-ProteinID: XP_038897771
LinkDB
Position
9:77986769..77996273
AA seq 1194 aa
MGTSGTKDDIEMNSEGEDLSPGTDMDTDDDDYYSEPVNIRDLGEAFLKDFCKKSSMAFFN
QYGLISHQINSYNDFIKSGIQKAFDYFGEILVQPGYDPSKKGDGEWRYASVKFGKVTLDK
PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEVYTQRLVSSDKFKTGKDKYVDK
EHVKEDNRDVFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEVPVWILFFA
LGVSSDKEIVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEVRKTS
FPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA
GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAH
SFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFISTP
DGENCGLIKNLSVTGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKYKIFLDGEWVGV
CEDSLSFVTKVRRKRRRNPLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKS
KGENYTFQSLLDRGIIELIGTEEEEDCRTAWSIKHLMEDEGTTKYSHCELDMSFLLGLSC
GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL
GTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY
KAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPYIGANLQSGDIVIGRCAES
GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFL
ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVD
AITEQLHRAGFSRWGSERVYNGRTGEMMQSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI
QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
NT seq 3585 nt   +upstreamnt  +downstreamnt
atggggacatcaggcacaaaggacgatatagagatgaatagtgagggggaagacttatca
cctggaacggatatggatacagatgatgatgattattattctgagccagtcaacatacgt
gacctgggggaagcatttctaaaggatttttgtaagaagtcatcaatggctttttttaat
cagtacggccttatcagtcaccaaatcaactcgtacaatgatttcataaaaagtggtatt
cagaaggcatttgattattttggtgaaattttagttcagccaggatatgacccctctaag
aaaggagatggggaatggagatatgcttcagtgaagtttggtaaggtaacccttgataag
ccaaagttctggggtggtgcagcaagtggaaaagagtataacatgcttcctaggcatgct
cgacttcagaacatgacttattcatcaaggatgaaaataaatatcagtttagaggtatat
actcaaaggttagtcagcagcgacaaatttaaaactggaaaagataaatatgtcgacaag
gaacatgtaaaggaagacaacagagatgtctttataggcaggctacctgtgatggttaat
tctgacctctgctggatgaaggaggagcagaaacgtgattgtgaatttgatcatggaggt
tattttttaatcaaaggtgcagaaaaaatatttattgctcaagagcaaatttgtttgaga
agactctggatttctaatattcaaggctggactgtggcatacagatcagaagttaagaga
aatagactaattatcagactagttgaaaattccaagtctgaagaactaaaaagcaaggag
aaagtcctcaatgtatattttttgtccacagaagttcctgtgtggattttattctttgca
cttggtgtttcatcggacaaagaaatagtagatttaatcgattatggcagagatgatcca
agtgttctgaatattctctttgcctctgttcgtgaagttgataatgatgataagtggaaa
gactttcgaagaggtaaaagagcgctgaattttttggacaatgaggttagaaagaccagt
ttcccacctgctgaaaaaattgaagattgcctgaacctgtatctttttgccagcttgaaa
ggcttaaagcagaagtgtcgtttccttggttatatggttaaatgtctcttgcaagcctat
actggccgtaggaaatgcgataatagggatgattttcgcaataagaggtttgagttggct
ggagaactgctcgaaagagagattaaagtacatattgcacatgcacgtagacgcatggaa
aaagctttacaaagggacctctatggggatcgtgatgtgcgtccaatagaacactatttg
gatgcttccataatcactaatggtctatcccgagcattctctactggagcatgggcacat
tcgtttaagaggatggaaaggatttctggtgtggtggcaactcttggtcgtgctaatccc
ttgcagacgatggctgaattgaggagaacacgtcaacaggttgcatacactgggaaagtt
ggtgatgcaagatacccgcatccttctcactggggaagagtttgcttcatctccactccg
gatggtgaaaattgtgggcttattaaaaatttgtccgtcacaggacttgtaagcttaaac
acattgaagccgatagttcccacattgtttcgctgtggaatggagaatttggtggatgat
acatctacttctcttagtggaaagtacaaaatttttctcgacggggaatgggttggagtt
tgtgaagattccctttcatttgtaacgaaagtgagacgcaagcgacgaaggaatccgtta
ttgcatcaggtagaagtcaaaagagacgaacaactgaaagaagtacgtatattttctgac
gctggaaggatattacgtcctctcttagtcgtagagaacttaaataggattgataagtct
aagggagaaaactatacttttcaatcccttttggacaggggaattattgaacttattgga
actgaagaagaagaagactgtcgtacagcttggagcattaagcatcttatggaagatgaa
gggactacgaaatattcccattgtgaacttgatatgtcatttttattaggtttaagctgc
ggacttgtcccgtttgcaaatcatgaccatgctaggagggctctgtttcaatcccagaag
cactctaatcaagctattggattttcaacaaccaattctaattttcgtgttgatacttta
tcccaccagttacactatccacaaaggccactttttcgtacaatgactgctgattgcctt
ggaacacctggatacctgtcatctcacaccggtatactaccaaaaccagagttctacaat
ggtcagaatgctattgtggcagtcaatgttcacctgggttacaaccaagaagattcatta
gtaatgaacagggcctctcttgagcgtggcatgtttcggtctgagcatatccggagttac
aaggctgaggtagataataaagaatcttcagagaagaggagaaaatctgacgatgcaata
aattttggaaagactcaaagtaaaattggaagagttgacagcttggacgaagatggcttc
ccttacatcggtgcaaatttgcagagtggagacattgtcattggtaggtgtgcggaatct
ggggctgatcacagtattaaactgaagcacactgagaagggaatggttcagaaagttgtt
ctctcttctaatgacgacgggaagaattatgctgttgtatccctcagacaggttcgatct
ccttgtcttggagacaagttttcaagtatgcatggacaaaagggagttctggggtttttg
gagtctcaagagaatttccccttcacaatccaggggatagttccagatattgttataaat
ccacatgcttttccttcgcgacagactcctggtcaattattggaagcggcacttgggaaa
gggattgcttctggcggttctctgaaatatgcaacgcctttctcaactccttctgttgat
gccattacagaacagcttcacagggcagggttttcaagatggggaagcgagagggtgtac
aatggccgaactggtgaaatgatgcaatcactcatattcatgggtccaacattctaccag
cgcttaatccacatggctgaagacaaggttaaatttcgcaacactggccctgtccaccct
ctcacacgacaacctgttgctgaccgaaagcgttttggcgggatcaagttcggggagatg
gaacgtgattgtcttatagctcatggtgcctcggccaacttgcacgaacgtctatttacc
ctcagtgactcttcccagatgcatgtttgccagaaatgcaagaatgttgctagtgtgatt
caacgatcggtggctggtggtcgtaagataaggggtccatattgtcgggtttgtgagtca
gttgacgatatcgtgagggtaaatgtaccctatggagcgaagctattgtgccaggagctc
ttcagcatgggcatcaatctcaagttcgaaacacaactgtgttga

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