Benincasa hispida (wax gourd): 120085928
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Entry
120085928 CDS
T07258
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhj03009
]
120085928
Enzymes [BR:
bhj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
120085928
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Other ribosome biogenesis factors
120085928
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
FtsJ
Methyltransf_25
RrnaAD
Ubie_methyltran
ASPP2-like_RA
PCMT
Methyltransf_31
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
120085928
NCBI-ProteinID:
XP_038898177
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Position
9:complement(79824020..79829019)
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AA seq
506 aa
AA seq
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MGRVTNRTKPSASGTAGKSENRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS
LVYAPSVRNKKGTFALVCKTLKYLPVIKDVLEAADLLSNKWKRQKELIYVIMYDILLGQK
THLAGDAEKFLMRQQSALQSVVRQLLSKKKASNIEDLIAPGDDPGVSRPRFIRVNTLKME
VHTAIKELGKKYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
PGWEVLDACSAPGNKTVHLASLMKGKGRIIACELNENRVKRLQHTIKLSGASKVLHGDFL
NLNPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKTSEDDLERLNKLAAFQRK
ALAHAFSFPAVERIVYSTCSIHQVENEDVVQSLLPLAESHGFQLDTPFPQWQRRGLPVFA
GANHLLRTDPVEDKEGFFIALFTKKQSTTQPFPRRSNRDKSFRYRGRNVRNSRAVACPPT
KISKLWLYQYAFSTRTRWRKNHSIQN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtgttaccaacagaaccaagccatcggcgtcgggaaccgccggcaaatcagaa
aatcggcggatgagcaacgccgaccgttcggcatacttcgcgaggagagaggcggcgaag
atattgcgccgtgttcttgagggagatgctcaacgtcgagccgtcgcctccatcaagtca
ctcgtttatgctccatctgttcggaataagaagggcacattcgctcttgtttgcaagact
ctcaaatacctccccgtaatcaaggatgtgcttgaggctgctgatttattgagcaacaaa
tggaagaggcagaaggaattaatttatgtcatcatgtatgatatcctcttaggccagaaa
actcatttagctggcgatgcagagaagtttctcatgcggcagcaaagtgctttacaatct
gtggttagacagcttttgtcaaagaaaaaagcaagcaatattgaagatttaatagctcct
ggggatgatcctggtgtttcaaggcctcgtttcatccgcgtgaatactctgaagatggag
gttcacacagcaataaaagaattaggcaaaaaatatgcagttcagaaggatgacatggtt
cctgacctcttggtacttcctccaggcagtgatttacatgatcatcctctggttgcagat
ggaagtatcttcatgcaagggaaggctagttcaatggttgcagtagcccttgatcccaaa
ccaggatgggaagtccttgatgcatgttcagctccgggtaacaaaactgtccaccttgcc
tctctcatgaaggggaaaggaaggatcatcgcatgtgaattgaatgaaaacagggtcaaa
cgcttacaacatactatcaaactatctggcgcttctaaagttttgcatggggatttcctc
aatcttaatccaaaagatccttcattatccaaagtccgtgccattcttttggatccttcc
tgctctggatctggaactgcagctgctagattagatcacttgctcccatcacatgttgaa
ggaaaaacctctgaggatgaccttgaacgactaaacaaactcgccgccttccagagaaag
gctctagcgcatgcattttcctttccagccgtagagagaattgtttacagtacttgttcc
attcatcaagttgaaaacgaagatgtcgtccagtcactattacctcttgctgaatcgcat
ggttttcaactggatactcccttcccacagtggcagcgacgaggtctcccagtgttcgct
ggcgctaaccatctactccgaaccgatcctgtggaagacaaagaagggttcttcatagct
ctttttacgaagaagcagagcacaacgcagccattcccccgcagatcaaatagagataaa
agctttagatatcgtggtagaaatgtcagaaacagtcgagcagtagcatgccctcctacc
aagatctccaaactgtggttgtatcagtatgcattttcgacaagaacacgatggagaaag
aaccactccatccaaaactag
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