Benincasa hispida (wax gourd): 120086149
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Entry
120086149 CDS
T07258
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120086149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120086149
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
120086149
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
120086149
NCBI-ProteinID:
XP_038898554
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Position
1:complement(4994314..5000372)
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AA seq
695 aa
AA seq
DB search
MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLVYNKYDEVGIVLFGTEDTKNELT
EEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKKFGVTEKGK
KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDADEKMMNEN
DNLLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSIIKIKVWVYKKTS
EEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRYGPQVVPIS
TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVLIPEPGNKRAIIAVSALARAMKE
MDKVAIVRCVWRQGQGSVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQFPSFSNLP
ALMQPSVEQQEAADDFVKMLDLAPAGREEILQPDLTPNPVLERFYRHLELKSKDPDAAVP
PLDGTLQKITEPDPDLFSQNKSVIDTFHRRFELKENPKLKKPRRHYLREKASGSSDKEDN
DEISAQIVESVSNMPIVKVEKIGDSTPLEDFEAMMSRRDSPEWISKAIIGMRNKIFDLVE
NSSDGDNYPKAIEYLRALRKGCIIEQEPKQFNDFLRHLRKFCLEKKLHSFCEFLASQQIS
LISKEEAADSEVADDEARSFWVKMEPKSEPKLEQF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacagggaaatcttggtgctggtgctggatgttggtccatcaatgcactct
attctccccgaggttgaaaaagtgtgttcaatgctagtagagaagaagctagtctacaac
aaatatgatgaagtaggaattgttctatttggaactgaagacactaaaaatgagctgaca
gaggaagttggtggatatcagcatgtggtggttttacagaacatgaaagtggttgatgga
gatcttgttgatgttctaaaacggatccctcgaggaactgtttctggtgattttcttgac
gccataattgtaggaatggatatgttgataaagaaatttggagtgacagaaaaggggaag
aaacgcttgtgtcttgttacagatgctctattccctataaaagaaccttatgaaggaact
aaagaggatcaagttacgaccattgcacaacagatgacaaaacatggcatgagaatggat
agtgttgttgtgagagggaggttcggtcaggatgcagatgagaaaatgatgaatgaaaat
gacaatcttttaaacatattttcagagaaaacaaatgcaaaaatggtgtatgtggagagt
ccaacttcattattaggtgcaatccggactcgaagcatagcgcctgtgacaatttttaga
ggcgatcttgagataagctccattatcaagattaaggtatgggtttacaagaaaacatca
gaagagaagtttcctactctgaaaagatattctgataaagcacctccaactgataaattt
gccacacatgaagtcaaggtagattatgagtacaaaagcgttgaagaacctagtaaggta
gtgcctccagaacataggattaaaggttatcggtatggacctcaagtggttccgatatcg
actgctgaatgggatgcagtgaagttcaaaccagaaaagagcgtgaagctactcggattt
acaaatgcatcaaatataatgaggcactactacatgaaagatgtaaatgtcttaatccct
gaaccgggcaataaacgagccattattgcggtttctgctctagcaagagcaatgaaggaa
atggacaaagtggcgatagtgcgatgcgtttggagacaaggacaagggagtgttgttgtg
ggtgtcttgacacccaatatatcaaagaaggacggtattgccgattcgttatacttcaac
gtacttccctttgcggaggatgttcgggaattccaatttccatctttcagcaatttgcca
gccttgatgcagccaagtgtagaacagcaagaggcagcggatgactttgttaagatgctc
gatctcgcaccagctggacgagaggaaattctacaaccggatctcacaccaaatcctgtt
ctggagcgcttctatcgccatctcgagttgaaatcaaaggatccagatgctgctgtacct
ccacttgatggaactctccaaaagattaccgagccagatccagacttgttttctcaaaac
aaatctgttattgatacatttcacagaagatttgagcttaaggagaacccaaagctaaag
aaaccgagaaggcattatttacgcgaaaaagcatccggttcaagcgataaagaggataat
gatgaaatttctgctcaaattgttgaatctgtttccaatatgcctatagttaaggtcgaa
aagattggagattcaactccactcgaagattttgaagctatgatgtctagaagagatagt
ccagagtggatcagtaaagcaataattggcatgagaaacaaaatatttgatcttgttgag
aactcctctgatggtgataactatccaaaagctatcgagtatttgcgtgcgcttcgcaag
ggttgcattatcgaacaagaaccgaagcaattcaacgatttcctccgccatctccgtaaa
ttttgtctggaaaagaaacttcatagcttctgtgaattccttgcatctcaacaaattagt
ttaatctccaaggaagaagccgctgacagtgaagtagcagatgatgaagctagaagcttt
tgggttaaaatggagcctaaatcagagcctaaattagagcagttctag
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