Benincasa hispida (wax gourd): 120086215
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Entry
120086215 CDS
T07258
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120086215
03041 Spliceosome [BR:
bhj03041
]
120086215
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120086215
Spliceosome [BR:
bhj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120086215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
120086215
NCBI-ProteinID:
XP_038898678
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Position
9:complement(6342711..6348473)
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AA seq
423 aa
AA seq
DB search
MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGN
VHTQVTEPLLQEVFGSTGLVESCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNDDKQSSDVKSIAELTNGS
SEDGKETVNSDAPENNPQYTTVYVGNLAPEATQVDLHRHFHSLGAGVIEEVRIQRDKGFG
FVRYSTHAEAALAIQMGNAQSFLCGKQIKCSWGSKPTPPGTISNPLPPPAAVPLPGLSTT
DLLAYERQLAMSKMGGVHALMHPQAPHPLKQAAMGMGAAGSSQAIYDGGFQNVAAAQQLM
YYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcagagattgaagcaacaacaacaacaagctttgatgcagcaagctttgctt
caacaacaatcgctttaccatcctggtctcttagctcaccctcagcttgaaccaattcca
agtgggaatttaccaccgggttttgatccaagtacctgccgtagtgtgtacgtgggaaat
gtacatacacaggtaacagaaccacttcttcaagaggtttttgggagcacaggccttgtt
gagagctgcaagcttgtcagaaaggagaagtcatcctatggatttattcactattttgat
cgcagatcggctgctatggctattttgtcacttaatgggaggcatttgtttgggcagcct
atcaaagtaaattgggcttatgctagtggtcagagagaggacacatcaggtcatttcaac
atttttgtgggtgatcttagccctgaagtgaccgattctactttgtttgcatgcttttct
gttttccctagctgttctgatgccagagttatgtgggatcagaagactggccgttccagg
ggatttggttttgtttcctttcgcaaccaacaggatgctcaaagtgcgataaatgacctg
actggcaagtggcttggaagtagacagattcgctgcaactgggcaacaaagggtgctggg
tccaatgacgacaagcagagctcagatgtgaaaagcattgcagaacttacaaatggatca
tctgaagacggtaaagaaacagttaatagtgatgccccggagaacaatcctcagtacact
actgtttatgttggcaatcttgctccagaggccacgcaggttgatcttcatcgccatttt
cattctcttggggctggtgtgattgaggaggtccgcatccagcgtgataagggctttggt
tttgttcgatacagcactcatgccgaggcagctttagctattcagatggggaatgctcag
tcgtttctctgtggcaaacagattaagtgctcttggggaagcaagccgaccccacctgga
accatctccaacccgcttcctccacctgcagcagttccattgcctggactctcaacaact
gatctcttagcatacgagcggcaactggccatgagcaagatgggcggcgtccatgccctc
atgcaccctcaggcgccacatcctttaaagcaggcagccatgggaatgggtgctgctggc
tcgagtcaggccatctacgatggtggctttcagaatgttgcggcagctcagcagctcatg
tattatcagtaa
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