KEGG   Benincasa hispida (wax gourd): 120086273
Entry
120086273         CDS       T07258                                 
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    120086273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhj03032]
    120086273
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120086273
DNA replication proteins [BR:bhj03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    120086273
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     120086273
SSDB
Motif
Pfam: PTCB-BRCT BRCT BRCT_2 LIG3_BRCT ECT2_BRCT0 TopBP1_BRCT0 DUF630 Ribosomal_L1
Other DBs
NCBI-GeneID: 120086273
NCBI-ProteinID: XP_038898754
LinkDB
Position
9:complement(72683816..72707377)
AA seq 972 aa
MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSPDH
EKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGFTCCLAMDGVKILASGFQEDEKVEIGK
LVNAMGGVLHMKASLDVSFVIAKNALAAKYKWALNISKKPIVTFAWLQQCWIEHRVVPQE
GYRVLPFSGLNISVSRIPAGERKEIEKLILQNGGRYSADLTRKCTHLICDAPEGDKYKVA
RTWGRINIVTRKWFDQSIARKACLNEELYPVGSVSGTSNKMTRGCLTAHNSQEKITGNLQ
AVPSSFIADSNFSAVSGPGFSDMDFEATLSQSTSMFSDASHFINEVDVEVPVVMGKNEEN
TDNCIANDFQSENDLYLSACRIKVVGFEASEMRKIVNMILRGGGSRYMLFNDKLTHIIVG
NPSEMEKKEVRDIAASGVIHVVRANWLEDCDRQKKEIPILGRHMAYDELIPKGLISSSKT
STIVMDPNKVPNVHPSVPSNVLEGNVHVRIGKTSTTEEKIEEKIETNVSGDRTMKLSQKS
HQCVANGTNKSQEKMWRDFMVPSGKSSCVFKGKIFCFSSSFPEDRRAEIVEWINQGGGEV
VEDHTKQKVHFTVECHGEIPRSTDVHTTYVSSHWVRSCLEDGCLWDTNGHILYSPLPCRV
PLSGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFSDGMKYEAACK
WGIHSITAEWIYECVRQSKIVSLDLYRPKEVTAQDRAAGLCTVSQFPTQTVQRIASESES
QFPIHSAIPRDQSTGTNSSSIGEVEQISFTKKRRKFLDEAIQKRSLFVGNSSTHFDCNLN
STKETTSKSSVVTSHVPDVAAAIEDLLEQTTKIHDQKSPGKTDCDKSIFPPDCSGVGQDH
SEAPPIGGLSNQWSKRAERKEDVNNPTTGDGSVGIYDGFSETQTESQVVGYEEDLSGRQM
LIDRVRTRSSMT
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgctgaagccgaagccattcgccggagctaatgtgtttgtctcccgcaatcttgtcgct
ccggagatgttcgacgctcttcacgacgctctcaagcagaatggggctgaggttttcctt
tgttgcgatccctctcgaaacggccctaatgattatcatgttatctcctcccccgatcat
gaaaagttcgaggatcttcgtgcgaagggatgcaatttgctaggtcctcagtgcgtgatg
tcatgtgcaaaagagcacagaccccttcctcaacagggttttacttgctgccttgcaatg
gatggtgtgaaaattctagcatccggatttcaggaagatgaaaaggttgagatagggaag
ttagttaatgcaatgggaggagtattgcatatgaaagcatcactagatgtcagctttgtt
attgcgaagaatgcattggctgctaaatacaagtgggcactaaacatttcaaagaaacca
attgtgacatttgcttggttacaacaatgctggattgaacatcgtgtagtgcctcaggag
ggatatcgagtccttccattttctggattgaatatatcggtatctaggattcctgcaggt
gagcgcaaggagattgaaaagcttatcttgcaaaatggtggaagatattctgccgatctt
acaagaaagtgcacacatttgatatgtgatgctcctgaaggtgacaagtacaaggttgca
cggacatggggccgtatcaatattgttactcggaaatggtttgatcagtccatagctaga
aaagcatgtcttaatgaggagttgtaccctgttggtagcgtttctggaacttcgaataaa
atgacaaggggttgtttgactgctcacaatagccaagagaagattactgggaacttgcaa
gctgtaccatcctcatttattgctgattcaaatttctcagcagtttctggtcctgggttt
tcagatatggattttgaagctactctttcacagagcacatctatgttttcagatgcttct
cattttataaatgaggttgatgttgaagtgccagttgtgatgggaaagaacgaagaaaac
actgataattgtattgcaaatgactttcagtctgaaaacgacctatatttgtcagcatgt
agaataaaagttgttgggtttgaagcttctgagatgcggaagattgtgaatatgattctc
agaggtggaggctcccgatacatgttgttcaatgacaaattaacacacataatagttgga
aatccctcggaaatggagaaaaaggaggtcagagatattgcagcttcaggagtcattcat
gttgttagagccaactggcttgaagattgtgatcgtcagaagaaggagatccctattctt
ggtagacacatggcatatgatgaacttattcctaaaggtttgatatcatccagtaaaacg
agcaccatcgttatggatccaaataaagttccgaatgttcatccaagcgtgccatcaaat
gtgttagaaggaaatgttcatgttagaattggaaagacatcgacgacagaggaaaaaatt
gaagaaaaaattgaaacaaacgtgagtggtgacaggaccatgaaattatcccagaaaagc
caccaatgcgtagcaaatggtacaaacaagagtcaagaaaagatgtggcgtgatttcatg
gttccaagtgggaagtcatcatgtgtgtttaaggggaaaatattttgtttttctagttcc
tttccagaagatcggagggctgaaattgtagagtggataaatcaagggggaggggaggtt
gttgaagatcatacaaagcagaaagtgcacttcactgttgaatgtcatggtgagatacca
aggagtacagatgttcatactacttacgtgtcaagtcattgggtccgatcatgtttagag
gatggatgcttgtgggataccaatgggcacattctctattctcctcttccttgccgtgtc
cctttgtctgggtttgaaaacatacggttctgtgtttcacaatatgatgataaagacaga
gtactgttaagaaatctgtgttttgtacttggggccaagtttgtggagaagttgacaaag
aaggtaacacatctaatatgtaagttttccgatgggatgaagtatgaggctgcttgtaaa
tggggaatacattcaattacagctgaatggatatatgagtgtgtcagacagagtaagatt
gtttctcttgatttgtatcgcccaaaagaagttacagctcaagacagagcggcaggctta
tgcactgtcagtcagtttcctactcaaactgtccaaaggatagccagcgaaagtgaatcc
cagtttcctatccattctgctatcccgagagaccaatcaactggaactaacagtagctct
ataggagaagttgaacaaataagttttactaaaaaaaggcgcaagttccttgacgaagct
atacaaaagcgttcactttttgttggaaacagttccactcattttgactgcaatttgaac
tccacaaaagaaactacatcaaaatcttctgtggtaacttcacacgtccctgatgtcgct
gccgcaattgaggatttgttggagcagacaactaagattcacgatcagaagtcacctgga
aagactgactgcgacaaaagtattttcccgcccgactgttcgggcgttggtcaagaccat
tcagaagctcctccaattggtggtttatccaaccagtggtcaaaaagagctgaaagaaaa
gaagacgtcaacaatcctactactggagatgggagtgtaggcatatatgatggctttagt
gaaacacaaactgagtctcaggttgtgggttatgaagaggatttgtcaggaaggcaaatg
ctcatagacagagttcgaactcggagtagcatgacttga

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