Benincasa hispida (wax gourd): 120086359
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Entry
120086359 CDS
T07258
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120086359
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120086359
Membrane trafficking [BR:
bhj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120086359
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120086359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_DCAF12
TPR_1
Clathrin
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
120086359
NCBI-ProteinID:
XP_038898903
LinkDB
All DBs
Position
9:complement(10390661..10403107)
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQIMVKSFEVTELPV
RSAKFIVRKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIVTGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKGSRRVVIGYDEGTIMVKLG
REVPVASMDNTGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSSDGEYAARESTSKIKIFTKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
SSDSAFYILKYNRDVVSSYLDSGRSVDEQGVEDAFTLLHETSERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASHSRVYLIDKEFNVIGYTLLLSLIEYKTLVM
RGDLERASEILPSIPKEHHNSVARFLESRGMIEEALEVATDPDYRFELAIQLGRLDVAKE
IATTVHSESKWKQLGELAMSTGKLEMAEECLKFAMDLSGLLLLYSSLGDAEGISKLASLA
KEQGKNNVAFLCLFTLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAADSLADPEEYPNLFDDWQLAVSVESKFSETRGVYPSAVEYANQADRSHTTLVEAF
RNMQVDEEELLENGDINLENGDEERAEHQNGEDSQEDPVVVDADSTDGAVLVNGNEADEE
WGTNNEGTQSA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagactagaaatcaagaggaaactcgctcaaagatcggaaagggtaaaatct
gtggatttgcatccaacagaaccatggattctggcgagtttgtattcgggaactgtatgc
atctggaactatcagtcccagatcatggtcaagtcttttgaggtcactgagttaccagtt
aggtcagccaagtttattgtgcggaagcaatgggttgttgctggtgctgatgacatgttc
atccgtgtctacaattataatacaatggataagataaaagtctttgaggctcatacagat
tacatcaggtgtgttgcagttcatcctacacttccatatgttctgtcatcatctgatgat
atgctcataaagctttgggattgggagaagggttgggtgtgcactcaaatttttgaggga
cattctcactatgtgatgcaagtaacatttaatcccaaagataccaacacctttgcaagt
gcttctcttgaccgcactattaagatttggaatcttggctctcctgaccctaattttaca
ttggatgcccatcagaagggtgtaaattgtgttgattactttactggcggtgacaaaccc
tatctaattactggttctgatgatcacactgctaaggtgtgggactatcaaaccaaaagt
tgcgttcaaacacttgaaggtcatacgcacaatgtgtctgctgtttgtttccatccagaa
ctacctatcattgtcacaggttctgaggatggtactgttcgtatatggcatgcaaccact
tacaggcttgagaacaccttgaattatggccttgagcgagtttgggctattggatatatt
aagggttcccgacgggttgtgattggttatgatgaaggaacgattatggtaaaacttggc
cgggaggtacctgtagctagcatggataatactggaaaaattatttgggctaagcacaat
gaaattcaaacagtgaatattaagagtgtgggagcagactatgaggttactgatggggag
aggttacctttggctgtcaaggaattggggacctgtgatctttatcctcaaagcttaaag
cacaaccccaatggacgatttgttgttgtatgtggagatggtgaatatattatctataca
gctttggcatggaggaataggtcatttggttcagcattggaaatcgtttggtcatctgat
ggagaatatgctgctcgagagagtacttcaaagataaagattttcacaaaaaacttccag
gaaaagaagagcatcagacctacattttctgcagagcgtatttatggaggaactctttta
gcaatgtgctcaaatgattttatttgcttttatgactgggctgagtgccggttaattcga
cggattgatgttaatgtgaaaaatctctattgggctgatagtggtgacctagtggcaatt
tccagtgattcagcattttatatcctgaaatacaatcgcgatgttgtttcctcttatctt
gatagtgggagatcagttgatgaacaaggtgttgaggatgctttcacgcttctgcatgaa
acaagtgaacgcgttaggactggcttatgggttggggattgtttcatttataataattcc
tcttggaggctaaattactgtgttggcggtgaggttactacaatgtttcatctggatcgg
cctatgtatttacttggatatcttgccagtcacagtcgtgtgtatttaattgacaaagaa
tttaatgtcataggatatacattacttcttagcttgattgaatacaagacacttgtaatg
cgtggagatctggaaagagccagtgaaatattaccttcaatccccaaggagcatcataat
agtgtggctcgctttttagaatctcggggtatgatagaagaggcactggaagtagcaact
gatcctgattatagatttgagttagcgatacagcttggtagattagacgttgcaaaggaa
atcgcgacgaccgtgcatagtgaatccaagtggaagcaacttggagaattggccatgtct
actggaaagctagaaatggcagaggaatgtctaaaatttgccatggacctgagtggtctg
ttactgctatattcttctttaggagatgctgaaggaatatcgaagcttgcttcccttgct
aaagagcaaggaaagaataatgttgccttcctctgtttatttacattgggtaaattagaa
gactgcctccagctattggtggaaagtaatcggatacctgaagctgcattaatggctcga
tcttatcttccaagtaaagtctctgagatagttgctatttggagaaaggacttgaataag
gtcaatccaaaagcagctgattcactagccgatcctgaagagtatcctaatctgtttgat
gattggcaactggctgtttctgttgaatctaagttttcagagaccaggggtgtttatcct
tctgcggtggagtatgctaatcaagctgacaggtcacatacaacacttgtggaggctttt
aggaatatgcaggtggatgaagaggagcttcttgaaaatggagatataaatcttgagaat
ggagatgaagagagagcagagcaccaaaatggagaagatagccaagaggatcctgttgtg
gtggatgctgattcaacagatggtgccgttcttgttaacggtaacgaggctgatgaagag
tggggtacgaataatgaaggaacccagtcagcctaa
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