KEGG   Benincasa hispida (wax gourd): 120086399
Entry
120086399         CDS       T07258                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
bhj  Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bhj03009]
    120086399
Ribosome biogenesis [BR:bhj03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    120086399
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 EIF3I WDR55 Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd WD40_Gbeta ASA1 WDR90_beta-prop_4th PAC11 Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_Aladin DSE1_N Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_LRRK2 Nucleoporin_N WDR54 Beta-prop_Vps41 CFAP251_N Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 120086399
NCBI-ProteinID: XP_038898957
LinkDB
Position
9:84654910..84663985
AA seq 447 aa
MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATAGS
VLYWSWCKPQVEVKSFPAEPIMALASNDEGTYIVGGGLSGDIYLWEVLSGRLLKKWHAHY
RAVTCLVFSEDDSLLISGSEDGCIRVWALLTVFDDGWQREAKHLYEHSFTGHNLPVTDIV
VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDVIALDPGEHVFYGGGRDGKI
YTAALNAKCPSTGDYGLHILGSLSNQSKSVTALAYCSSGNLLISGSEDGAIRVWDTRTNN
VIRVFRHSKGPVNNILLVRQQVLPKSQSTSQGFLRKHRSLLPPALAKFENSKDEDEDTGV
IIGPTGLPKESMGFPALSSHVMDNQITELQQQGSAANGMELERLKYDCGKSMQMLQHWRK
MYDNLHQFCVNELLDGDQTKNIQGNSA
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggttctagtggttgcttcgtcgtccattgattcgggaattggttgctgggacctccac
acgggtgcagaacaactacgttacaagtcctgtgcttctccggcacacggtcttgtttgt
gttggtgaaaggtttctcgcctgctctcagcttcgcgatcccgctgctaccgcaggctcc
gttctctactggtcttggtgtaagcctcaagtagaagttaagagctttccggctgaacca
ataatggccttggcttccaacgatgagggtacttatatcgttggtggtggtctctctgga
gatatatacttatgggaggttttgagcggtagactgcttaagaaatggcatgctcattat
agggcagttacttgtctcgtattctccgaagatgactccctgctaatttccggttctgaa
gatggctgcattagagtttgggcccttctaacggtatttgatgatggatggcaaagggaa
gcaaaacatttgtatgaacatagtttcactgggcataatctacctgttactgatattgtt
gttggctatggaggatccaatgctattataatctcttcctctgtggatcgtacgtgtaag
gtgtggagcttatcgaaggggaagttattaagaaatatcatatttccttcaatcattgat
gtaattgctttggatcctggtgaacatgtcttttatggtggtggtagggatgggaagatc
tacactgctgcgcttaatgctaaatgcccatccactggtgactatggattgcatattctt
ggctcattatcaaatcaaagcaagtctgttactgccttggcatactgctcaagtggtaat
ttgttgatctctggatctgaggacggagcaataagagtttgggatacaagaaccaataat
gttattcgtgttttcagacattcaaaaggtcctgtaaataatatactacttgttcgacaa
caggtcctccctaaatcacagtcaacttcccaaggttttttgagaaagcaccggtcactg
ctacctcctgcccttgcaaaatttgaaaactcaaaggacgaggatgaagacactggtgtt
atcattggtccaacaggtcttcccaaggaatctatggggtttcccgcccttagttctcat
gttatggataatcaaataacagaacttcagcaacaaggttctgctgccaatggaatggag
ttggaaagactcaagtatgattgtggaaaatccatgcaaatgctacaacattggagaaaa
atgtacgacaatttacatcaattttgtgttaatgagcttctggacggcgatcaaactaaa
aatatacaaggcaattccgcttga

DBGET integrated database retrieval system