Benincasa hispida (wax gourd): 120086403
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Entry
120086403 CDS
T07258
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03440
Homologous recombination
bhj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120086403
03450 Non-homologous end-joining
120086403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhj03032
]
120086403
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120086403
DNA replication proteins [BR:
bhj03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120086403
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120086403
BRCA1-C complex
120086403
NHEJ (non-homologous end-joining)
MRX complex
120086403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
120086403
NCBI-ProteinID:
XP_038898959
LinkDB
All DBs
Position
9
Genome browser
AA seq
719 aa
AA seq
DB search
MGDLSRDEMKNTLRILVATDCHLGYLEKDEIRRHDSFKAFEEICSIAEQKQVDFLLLGGD
LFHENKPSRSTLVKAIEILRRHCLNDKPVQFQVVSDQTINFPNTFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLCPILIKKGSTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVTDWFNILVLHQNRVKSNPKNAINEH
FLPRFLDFIVWGHEHECLVDPLEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLTTVRPFEYTEIVLKDEPDIDSNDQNSIIEHLDKVVQNLIEKSSKRVVNRSE
LKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASRKGRNEVKIDDSERLR
PEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLEETRSKIA
QDADSLKFEEEDLILKVGECLEDRVKERNNRSKNDTAFTSSIQSSKDFGSRSSTAVGSAV
SFSDDEDTVKASGSKSTRGRKVPSKAADDTSIKTSTRGRGRGRGRGSSSSLKQTTLDAAL
GFRQSQRSATAAVRSIVNTDAMNSASSGEPRENEVEEINDSSENDESPLSKGRKRAAPRG
RGRGTTQSKRGRKSNTSSVQRTYMGRDDGDGDSEDEENARKLLNKSQPRVTRNYGALRR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttatctcgggacgagatgaaaaatacacttcgaatacttgtcgcaacagat
tgccatctgggctatttggagaaggatgaaatacggcgacatgattcattcaaggctttt
gaagagatatgctcaattgcagaacaaaagcaggtggatttcttacttcttggcggtgac
cttttccatgagaacaagccatcacgatcaacattagtgaaggcaattgagatcctgcgt
cgtcattgccttaatgataaaccagtgcaattccaagttgttagcgaccaaaccatcaat
tttccaaacacatttggtcacgtcaactacgaagatcctcattttaatgttggcttgcca
gttttcagtattcatgggaaccatgatgatcctgctggagtggacaacctttctgctgtt
gatattctctctgcatgcaatcttgtgaactacttcgggaaaatggttcttggtggttct
ggtgttggtcagatcaccctctgccccattcttatcaaaaagggttcaacatccgtggct
ctgtatggtcttggaaatattagagatgaaaggctgaacaggatgttccagacaccacat
gctgttcagtggatgcggcctgaagcccaggaaggctgccaagtgacagactggttcaac
attctggtacttcatcaaaacagagtaaagtcaaatcctaagaatgcaataaatgagcat
tttttacctcgcttcctggacttcattgtttggggacatgaacacgaatgtttggttgac
cctttggaagttcctgggatgggtttccacatcacacaaccaggttcctcagtcgcaaca
tcactgattgatggtgaatcaaagccaaaacatgtccttttgttggaaattaagggtaat
caatatcgaccaaccaagatacctttgacaactgtaaggccatttgagtacacagagatt
gtattgaaggatgagcctgacatcgactctaatgatcagaactcaattattgaacacttg
gacaaagtggttcaaaatttgattgagaaatccagcaaaagggttgtaaacagatcagag
ctcaagcttccattagtccgcataaaggtggattactctgggtttatgacaataaatccc
caaagatttggtcagaaatatgttgggaaggtagcaaatcctcaagacatccttatattc
tcaaaagcttcaaggaaaggtcgcaatgaagtgaaaattgatgattcagaaaggcttcgt
ccagaagaactgaatcaacaaaacatagaggctttagttgcagaaaataatctgaaaatg
gagatccttcctgtcaatgatttggatgttgcactgcacaattttgtaaataaagatgac
aaaatggcattttattcctgcgttcaatacaatctagaagaaacacgaagtaaaattgct
caagacgcagattctttgaagtttgaagaagaagatttaattcttaaagttggggaatgc
ttggaggaccgagtcaaggagaggaacaaccgttctaagaatgatacagcattcacatca
tctattcagtcatcaaaagatttcggtagtagaagttccacggcagttgggtctgctgtt
tctttcagtgatgatgaggatacagtaaaagcatctgggtcaaaatccactagaggtcgg
aaagtaccatctaaggcagctgatgacacttcaattaaaacttccacacgaggaagagga
aggggtagagggaggggatccagtagtagcctgaagcagacaactcttgatgcagctctt
ggatttcgccaatcacagagatctgcaactgctgctgttcgaagcatagtcaacacagat
gctatgaattctgcttctagcggagaaccaagggaaaatgaagttgaagaaattaacgac
agttcggaaaatgatgaaagtcctctcagcaaaggaagaaagcgcgctgctccaaggggc
agagggagaggaaccactcagtctaaacggggaaggaaatcaaacacctcttcagttcag
agaacgtacatgggtagagatgacggcgatggtgacagcgaagatgaagaaaacgctaga
aagctattaaataagtcgcagcctcgggtgacaagaaattatggtgcattgagaaggtaa
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