Benincasa hispida (wax gourd): 120086635
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Entry
120086635 CDS
T07258
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Module
bhj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120086635
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120086635
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF3899
Sre
Motif
Other DBs
NCBI-GeneID:
120086635
NCBI-ProteinID:
XP_038899303
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Position
9:13876675..13882353
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AA seq
458 aa
AA seq
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MMCCQLFSHRCCLLLLSFLITMAISEFFSTCSGSYADIDPPPSISSGDKEDHDQHYYEYS
SEFSSMLRTRLEKMAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNAIFLV
PCDRIYHLKPITFSGPCNSPLLFKIEGTIKASPHISDYEKDRRHWIIFQNISNFRVEGKG
IINGNGRKWWSNSCKVNKTLPCKEAPTAVTFYECTNLRVEGIRFRNAQRMHLSFQKCNNV
KALNLWIYAPGNSPNTDGIHVTGTQSIVIKNCLIMTGDDCISIVSGSKNVRAKGITCGPG
HGISIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVT
NPIIIDQNYCDQKEPCTQQADAVQVSNVMYQNIRGTSASEVAVKFDCSKSFPCQGILLQD
INLVRKGKNDDKSTQAEASCKNVKLKNRGRVSPQCAGR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgctgccaattattcagtcatcgttgttgtcttcttcttctttcctttctaatt
accatggccatctccgagtttttctcaacatgttctggctcgtatgctgacattgatcct
ccgccgtcaattagcagtggtgacaaagaagatcatgatcaacattattacgagtactcc
tctgaattctcaagcatgttgaggacgaggttagagaagatggcaccgtcgcctgtagcg
tcgtccgaaatattcaacgtcgatgattatggagcaatgggtgacggagaagacgatagc
gaggcgtttaaagaagcttggaaggacgcttgttcttctacaaatgccatttttttggtt
ccatgtgacagaatttatcatcttaagccaatcaccttctctggtccttgtaactctcct
cttctatttaagatcgaagggacaataaaggcatccccacatatatcagattatgagaaa
gacagaaggcattggattatttttcaaaatatatcaaattttagagtggaaggtaaaggc
atcattaatggaaatggaagaaaatggtggtcaaattcatgcaaagtcaataaaactctg
ccttgcaaggaagctccaacagctgttacattctatgaatgtaccaatctaagggtggaa
gggataaggttcagaaatgcacaaaggatgcatctttcttttcagaaatgcaacaatgtc
aaagctctaaatctctggatatatgcaccaggaaacagccccaacactgatggcatccat
gtcacaggcacccaatcaattgtcataaaaaactgtcttataatgactggtgatgactgc
atttcgatcgtaagtgggtcgaaaaatgtccgagcaaagggcatcacttgtggaccaggt
catggaatcagtattggaagcttgggagctggaaaatcagaagcggaggtttctaatgtg
gtggttgatacagcaaagttttcaggaacatcaaatggagtgagaattaaaacttggcag
ggaggaaaagggtatgcacaaaacataatattccagaatattgtgatggacaatgtgacc
aacccaataatcatagatcaaaactactgtgaccagaaagaaccatgcacacaacaggca
gacgcagtacaagtgagtaatgtaatgtaccagaatatcagaggcacaagcgcttcagaa
gtggctgtgaaattcgattgcagcaaaagcttcccatgtcagggaattcttctacaagac
atcaatctggttcgcaaaggaaaaaatgacgacaaatcgacccaagctgaagcttcctgt
aaaaatgtcaagttgaagaacagaggaagggtttctccacagtgcgctggacgatga
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