Benincasa hispida (wax gourd): 120086701
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Entry
120086701 CDS
T07258
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120086701
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120086701
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
120086701
NCBI-ProteinID:
XP_038899392
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Position
9:complement(68184127..68190315)
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AA seq
639 aa
AA seq
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MANEILQLDIQDHHVVMDNGILQVTLSKPDGNVTGIKYNSIDNVLEVDDKEAHRGYWDLV
WNSGTPGTTGTFDEMRGKEFEVIVQNEEQIELSFKRNYPFKDEAVPLNIDKRFIMLRNSS
GFYSYAIYEHMKEWPPFNLPQTRIVFKLRKDKFHYMAIADDRRRFMPLPEDRLRHRGKPL
DFPEAVLLVNPKEPKFKGEVDDKYQYSCENKDLKVHGWISMDPPVGFWQITPSSEFRSGG
PLKQNLTSHVGPYALAMFLSAHYSGEDLVLKLSPDEPWKKVFGPVFFYLNSVSDGVDPLS
LWEDAKTQMTKEVQSWPYSFPASEDFPPPNQRGRLTGKLFVLDRYVNQDKMLATDAYVGL
AAPGDAGSWQTENKGYQFWTKTDADGSFSIEHIRIGDYNLYAWVPGFIGDYRYDAVISVS
AGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYVPDPDPKYINKLYVNHPDRFRQYGL
WEKYAELYPDADLVYTVGVSDYTKDWFFAHVNRTRNDGSHLATTWEIKFTLDNVIEKSGT
YTLRVALATANVAELQIQVNNPEAKPSLFTTGVIGHDNTIARHGIHGLYRLYSVDILGSL
LVEGDNTIFLSQIINNSSFNGVMYDYIRLEGPPSDTSTS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgagatactccaattggatattcaggatcatcatgtagttatggacaatggt
atattgcaagtgacactgtccaagccagatggaaatgttactgggataaaatacaacagc
attgacaatgttttagaagttgatgataaggaagctcatagagggtactgggaccttgtg
tggaactctgggactccaggaacgacaggaaccttcgatgagatgagaggaaaagaattt
gaagtgattgtgcaaaatgaggaacagatagagctctcatttaaaaggaattatccattt
aaggacgaggctgttcccttaaatatagacaaaaggttcataatgcttcgtaactcctct
ggattctactcctatgccatctatgagcacatgaaggaatggccaccattcaaccttccc
caaacaaggattgtgtttaagctaagaaaagacaagtttcattatatggccatagcagat
gacagacggagattcatgccacttcctgaggatagactacgtcatagaggaaaacctttg
gattttccggaggctgtattgctagtcaatcctaaagaacccaagttcaagggagaggtg
gatgataagtaccaatattcttgtgaaaataaagatcttaaagtgcatggatggatatcc
atggatcctccagtgggtttctggcaaatcactccaagcagtgagttcagatcaggtgga
cccctcaaacagaatcttacctctcatgtgggtccatatgctcttgctatgttcctcagc
gctcattattcaggagaggacttggtgctgaagctcagtcctgatgaaccatggaagaaa
gtttttggccctgtgtttttctatctaaattctgtttctgatggagttgatccactttct
ttgtgggaagatgctaaaactcagatgacgaaggaagttcaaagctggccctattctttt
ccagcttctgaggatttccccccaccaaaccaacgtggtagattgactggcaaattattt
gtccttgacagatatgttaatcaagataaaatgctggcaactgatgcatatgtgggactg
gcagcaccaggagatgctggatcatggcagaccgaaaacaagggttaccagttttggacc
aaaacagatgcagatggctcgtttagcattgaacacatacgcatcggcgactacaatctt
tatgcttgggttcctggcttcattggtgactaccgttatgatgctgtcattagtgtctct
gcaggtagtgatatggacgtaggtgatcttgtttatgagccgcctaggaatgggccgaca
ttgtgggaaataggaattcctgatcgctctgctgctgaattctatgttcctgatcctgat
ccaaagtacattaacaaattgtatgtcaatcatccggatagattcaggcaatatggactg
tgggaaaaatatgcagagttatatcctgatgcagacttagtatatacagttggtgtcagt
gattacacaaaagattggttctttgctcatgttaatcgaacgagaaatgatggatcccat
ttagcaaccacgtgggaaatcaagtttacacttgataatgtcatagaaaagagcggcacc
tatacgttgcgagtggctctggccaccgccaatgttgctgaattacagatccaggtaaat
aatccagaagcaaagcctagtttatttacaacaggagtgattgggcatgacaatacaatt
gctaggcatggaattcatggactctatcgactctacagtgtggacatattaggatctcta
ctggtggaaggagataacaccatcttcctttcacaaattataaacaactcatctttcaat
ggcgtcatgtatgattatatccgcctcgaaggccctccatccgacacctctacttcataa
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