Benincasa hispida (wax gourd): 120086702
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Entry
120086702 CDS
T07258
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120086702
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120086702
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Chromo_MORC2_6th
EMC7_beta-sandw
LPD16
Motif
Other DBs
NCBI-GeneID:
120086702
NCBI-ProteinID:
XP_038899393
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Position
9:complement(68190288..68199342)
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AA seq
638 aa
AA seq
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MDNGIIGVNLSNPKGMVIGIQYKGVENLLEVGNAEDDRGYWDIVWNLAGSSGTKGIFDRL
EATDFKVIVENDEQIELSFSRTYNSSTGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKE
WPAFIIDNTRIVFKPRKDKFHYMAVADKRQRFMPLPDDRKPPQGEALAYPEAVLLVDPIE
PEFKGEVDDKYQYGCESKDARVHGWISTDPPIGFWHIAPTEEFRSGGPLKQFLTSHVGPT
TLTVFHSAHYAGEDMVVKFGCNEPWKKVFGPIFIHLNSFPEGEDPLRLWQNAKEQMMAEV
QSWPYGFLASEDFPKSDQRGTVNGRLIIRERYVSDEYVPASGAYVGLALPGELGSWQTES
KGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYNAFIAVTPGSDINVGELVFE
PPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDRFRQYGLWERYTELYPDEDL
VYTVDLSDYRKDWFFAQVTRKIEDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAE
LQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRLYTVDIPGGELVVGNNTILLTQAS
SNSPFVGIMYDYIRLEGPLTSKIFAVEVKCMKQDALED
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggacaacggcataatcggggtcaacttgtcgaatccaaagggtatggtcattggaata
caatacaaaggggttgaaaacttgcttgaggttggcaatgccgaagatgatagaggatat
tgggacatcgtttggaatctggcaggaagttcaggaacaaagggcattttcgatcgactt
gaagcaacagatttcaaggtaattgtagaaaatgatgaacaaatagaactctcattcagc
agaacttacaattcatccaccggaggcgatctcattcccttaaacatcgacaaaaggttc
gtgatgcttcgtaattcatcaggattctattcgtacgccatttacgaacacttgaaagaa
tggcctgcgtttatcatcgacaacactagaatcgtattcaagccccgaaaagacaagttt
cattacatggctgtagcagataagagacagagattcatgcctttgcccgacgatcggaag
ccaccgcaaggggaagccctagcttatccggaggccgtacttcttgtcgatcctatagaa
ccagagttcaagggagaggtggatgacaagtaccaatacggctgcgaaagcaaagacgct
cgggttcacgggtggatatccaccgacccgcccattggcttttggcatatcgcacccacc
gaggagttccgctccggtggacccctcaaacagtttctcacctcccatgtcggtcccaca
acccttactgtttttcatagtgctcattacgcaggagaggatatggttgtaaagttcgga
tgtaatgagccatggaagaaggttttcggtcctatctttatccatcttaattcctttcct
gaaggagaggatccgcttagactctggcaaaatgctaaagaacagatgatggctgaagtt
caaagctggccttacggtttccttgcttctgaggattttcccaaatccgatcaacgaggc
accgtcaacggcagattgataatccgggagagatatgtgagtgatgaatatgtgcctgca
agtggtgcatatgtggggttggcacttcctggagaacttggctcttggcaaaccgaaagc
aagggctaccaattctggactagagcagatcagaatggatctttctctttgaataatgtt
cgcagcggaaattatagtctctatggatgggtccccaattttattggcaattaccaatac
aacgctttcatcgccgtaaccccaggcagtgatatcaatgtgggagaacttgtttttgag
cccccaagagatggtccaacattgtgggaaataggcattcctgaccgtactgctgcagaa
ttctatgtgccagatcctaatccaaagtatattaataaactttatgtcaatcattcagat
aggtttaggcagtatggattatgggaaagatacacagagttatatcctgacgaggatcta
gtttatacagtcgaccttagtgactatagaaaagattggttctttgcacaggttaccagg
aagatagaggacaacaaatatgctggaactacctggaaaataaagttccaacttgacagt
ccagatacacatggaacatataggctgcgtcttgcattggccactgcacatgctgcagaa
ttacaagttcgactgaatgatgcacaagcacttcctccattattcacaactggattgatt
ggaaaggacaatactatagctagacatggaatccatggtctctatcgtttgtacacggtt
gacattccgggtggtgagcttgtggtgggcaacaatacaattcttcttacgcaagcaagt
agcaacagtccttttgtagggatcatgtatgattatattcgtctagaaggacccttaaca
tccaaaatattcgcagttgaagttaaatgtatgaaacaagatgctttagaggattag
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