Benincasa hispida (wax gourd): 120086708
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Entry
120086708 CDS
T07258
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120086708
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120086708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
NBCH_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
TPR_1
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120086708
NCBI-ProteinID:
XP_038899403
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Position
9:complement(67298673..67312825)
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AA seq
758 aa
AA seq
DB search
MEDFAFHDGNVCGLLESRHISFRQDPTYGLQMHSSFIQRLSQEKELEGHQGCVNAVAWNS
RGSLLISGSDDTRINIWSYSGRKLLDSVDTGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLRGRGQDDNPIASSALYRCHARRVKKLAVEIGNPNVVWSASEDGTLRQHDFREG
MSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSG
EHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPVLNGLELQPSISNLSNGLPLNCGVNAKLD
KCRKLLQIAEKCLDSGNYFGGIEACNEILDGYGRSIGVIFKHDTLCTRAALLLKRKWKND
VHMAIRDCYSARKMDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVE
SVKRDLAAAELEKSNKGNDGAIRSAPLGGVLSLSDFLYRSDANSDVSQDGPRSEREDSDY
DEEVELDFETLSGDEAHDVDSNVLHGSLNLRIHRRVDPARDRVGPNGSCGSPSSSQNDTT
LYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKGTGRLIKIL
VGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTASVPSLVAGGAVGPQAADVLAAIENN
QRRLCRNREAILPFEILERFRMHDFSEGSLHPFECAQS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttcgcctttcacgatggcaacgtctgtggtttgctcgagagcaggcacatc
agctttcgtcaagatcccacatatggtttgcagatgcactcatcattcatccaaagactc
tcccaggaaaaggaactggaggggcatcaggggtgtgttaatgcagtggcctggaattct
cgtggttcgctgttgatatctggatcagatgacactcggataaacatctggagctattct
ggtcgaaagctattggactctgtggatactgggcattctgcaaacatattttgtacaaaa
tttgttcctgaaacgtctgatgagcttgtggtctctggagctggggatgcagaggtgcgg
ttgtttaatttatctcgcttaagagggagaggacaagatgataatccaatagcttcatcg
gctttgtatcgctgtcacgccagaagagtaaaaaaattagctgttgaaataggaaatcca
aatgtagtatggagtgctagtgaggatgggactcttagacagcatgactttcgagagggc
atgtcttgtcctcctgatggagcttctcaccaagaatgccacaatgttcttcttgatttg
cggtgtggagcaaagaggtcattggctgatcctcccagacaaacccttgctttgaaatcc
tgtgacattagttccactaggcctcatttacttctggttggtggaagtgatgcatttgca
cggttatatgatagaaggatgctgccacccttgtcttccagccagaagaggatgtcgcca
cctccttgtgttaactacttctgtccaatgcatctctctgatcgggtccgatcgggtttg
catttgactcatgttacttttagtccgaatggagaagagatcctgcttagctatagtgga
gaacatgtatacttgatgaatgtaaatcatgctggtctgggtacaatgcagtatacatca
ggagatgtttctaagttaatgagcttcactcctgtactcaacggattggaattgcagcct
tccatttccaatttatctaatggtttgccattaaattgtggtgtcaatgcaaagcttgat
aaatgcagaaaattattacaaattgctgagaagtgcttggacagtgggaactactttggt
ggaattgaggcatgcaatgaaattttggatggatatggtcgtagtattggcgttattttc
aaacacgatacattatgcacacgtgcagctttattactcaagcggaagtggaagaatgat
gttcatatggccataagagattgttacagtgccaggaaaatggatcattcctctttcaga
gcacattactacatgtgcgaagctctatcacagctgggtagacataaagaagccctagat
tttgcgtttgctgcccagtgtttagccccatctaatcctgaagtggcagagaaggtggaa
agtgtaaagagggacctcgcagcagctgaattggaaaaatcaaataaaggcaatgatgga
gctataagatcagcaccgttaggtggtgtattatcattaagtgactttctttaccgctca
gatgcaaatagtgatgtttcacaagatgggccgagatcggaaagagaagattctgattat
gatgaggaggtggagctggactttgaaaccttatcgggtgatgaagcccatgatgttgat
tccaacgttctacatggaagtttaaatcttagaatacatagacgagttgatccagcaaga
gatagggttggcccaaatggctcctgtgggtctccttcatcatcacaaaatgatacaaca
ctttatcagcctgaacccgtcattgatatgaaacaaagatatgttggtcattgtaatatc
ggaactgatattaaacaagccagttttctcgggcaaagaggtgaatacgttgccagtggt
agtgatgatggtagatggtttatttgggaaaagggaactggtagactgattaaaatactt
gttggagatggagctgttgtgaattgcgtgcaaagtcatccatttgattgtgccattgct
actagcggcatcgacaataccataaagctatggactccaactgcttcagtcccgtcactt
gtagccggtggggcggtcggaccgcaggcagccgatgtgttggctgccatagagaacaat
cagcgcagactctgccgtaatagagaagcaatactgccttttgaaattttagagcggttt
aggatgcatgatttctcggaaggaagccttcatccatttgaatgtgctcagagttga
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