Benincasa hispida (wax gourd): 120086771
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Entry
120086771 CDS
T07258
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120086771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhj03032
]
120086771
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120086771
DNA replication proteins [BR:
bhj03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
120086771
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120086771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
120086771
NCBI-ProteinID:
XP_038899491
LinkDB
All DBs
Position
9:complement(18710020..18720881)
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AA seq
1211 aa
AA seq
DB search
MEIDYSGKAFLGVQFVLFGFNNVDEKQVRSKLIDGGGVDVGQYGPSCTHVIVDKNKIVHD
DPVCVAARNDGKLLVTGLWVDHRYDSGLLADATSVLYRPLRELSGIPGAKSLIMCLTGYQ
RQDRDDVMTMVGLMGAQFSKPLVANKVTHLICYKFEGDKYELAKKLRTIKLVNHRWLEDS
LREWMLLPESNYNISGYDMEMLEAEAKDSEEESNSSITKHFARRSTKSPDNMKFGLHSTS
EISNTLPASKPMDGRTNFAETKSMLTVPTTNTKYSPSGKFDRHDAVRGPICQEDDVFSTP
WGSVPSDMHTKTSESEKQKVKNEAVTSPSNSARSPRLCATSYSRRTPLKSPLPLFSGERL
DRADVSCEMGTGEMKDTIDVDVSLEKMEQVTYATFSGHEPNSPRGTDLFRTGDSNARLPL
KSISDVSYDVSQSHSMSEITKSCTLNNPSMDEKILGLKMRSVSLNNNDSGECRAENLQHS
RVITNSSSSIKKPLMSDLPFSNSVRTPTADVAESSKKTPQTPCQISGKDTSPDKSDKLNH
VYGISRDVVGKTKETDRQQNDVLATSESDRGTEAMKSALPTNLNSSVVQSNNLHSKQQRI
KMFAKKSLGSRPKLGSASRRASVLSNETTSLNDSVSSCGNGEKLLSSSPQNVSIGVKKVL
ETIDMGDFSHKYEAMDVDDKITDPGNPENKEADFEQQKMDKENFKEVQLISDEDKLAKET
ASGVKCNNSASVLDDTIPSGTLKEVIEPREPVSIKNVQRDELRVEDEKSKLNVGDSGPTG
ATMSLNSSKMKSKLGKVGKAPPHKKNRKTGKKSQLVAAGPNAEVHTIPDYKSEKENVPCD
VGDKTSDLVKHCLDKTRVKSNTRQRKANKKCSEISANSSMEVDEVLREVKPEPVCFILSG
HRLERKEFQKVIKHLKGRVCRDSHQWSYQATHFIAPDPVRRTEKFFSAAASGRWILKSDY
LTDSSQAGKLLKEEPYEWYKNGLTEDGAINLEAPRKWRLLREKTGHGAFYGMRIIIYGEC
IAPPLDTLKRAIKAGDGTILATSPPYTKFLRSGVDFAVIGPGMPRADTWVQEFLNDEIPC
VAADYLVEYVCKPGYPLDKHVLYNTHAWAERSFSNLQSRAEEVAEDASSQDDCSDEDIAC
QECGSRDRGEVMLICGNEDGSNGCGIGMHTDCCNPPLLDIPEGDWFCSDCISSRNSNSPN
KRKKGVLVKRK
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgattattccggcaaagcgtttttaggtgttcagttcgttctctttggattc
aataacgtcgatgagaaacaggttcggtctaagctaatcgatggcggcggggttgatgtt
ggtcagtatggtccgagttgcactcatgtgatcgtggacaagaataagattgttcatgac
gatccggtttgtgttgctgctcgaaatgatggcaagttgcttgtcacgggcttatgggtt
gatcatagatatgattctgggttgcttgcagatgctacttcggtattgtacagaccgtta
agagaactgagtggtatcccaggggctaaaagtttgatcatgtgcttgactgggtaccaa
cgacaggatagagatgatgttatgacaatggttggcttgatgggtgctcaattctctaag
ccattggtggcaaacaaggttacccacctcatatgttacaaatttgaaggggataaatat
gagcttgctaaaaaactgaggaccataaagcttgtcaatcatcgttggctggaagacagc
ttgagagaatggatgctacttccagaatcaaattacaacataagtggatatgacatggag
atgcttgaagctgaggcgaaggattctgaagaggaatctaacagtagcatcaccaaacat
tttgcaaggagaagcactaagagtcctgataacatgaaatttggtttgcattcaaccagt
gaaatatctaatacactgccagcttcaaagccaatggatggccgcacaaactttgctgaa
actaagagcatgttgacggttcctactaccaacactaaatatagtccttctggaaagttt
gataggcatgatgctgtcaggggacctatttgtcaggaagatgatgtttttagtactcct
tggggttctgtgccatctgatatgcatacgaaaacttctgaatctgagaagcagaaagtg
aaaaatgaggcagtgacaagtccatcaaattcagcaaggtctccgcggctgtgtgctacc
agttactctaggagaaccccattgaagtcgccacttccactgttttctggagaaagattg
gacagagctgatgtctcatgtgaaatgggaacaggtgaaatgaaagatactattgatgtc
gatgtatctttagaaaagatggagcaagtaacgtatgccactttctctggccatgaacca
aattctccaaggggaactgatttatttcgtacaggagattcaaatgctagattgcctttg
aaaagcatttcagacgtatcttatgacgtctctcaatctcattcaatgagtgagatcaca
aaatcatgcaccttgaataacccctccatggacgaaaaaattttaggattgaaaatgaga
agtgtttctttaaacaacaatgattctggcgagtgtcgtgctgagaacttgcagcatagt
agggttattaccaacagctctagttctattaagaaaccattgatgtccgacctacctttc
agcaacagtgttcgcactccaactgcagatgttgctgagagcagtaagaagactcctcaa
acaccctgccagatatcaggaaaagacacgtcacctgacaagtctgacaagctaaatcat
gtttatgggatttctagagatgtggttggaaaaactaaagaaacagataggcagcagaat
gatgttctggctacatctgaaagtgatagaggtacagaggctatgaaatcagccttgccg
actaatttgaattcttctgttgttcaaagtaataacttgcattccaaacaacaaagaatt
aagatgtttgccaaaaagagcttgggttctagaccgaagttgggcagtgccagtcgaagg
gcttctgttctctcgaatgaaaccacttctttgaatgattcggtttcatcttgtgggaat
ggtgaaaaactcttaagctcatcacctcaaaatgtcagtattggagtgaaaaaggttttg
gagacaatagatatgggggatttttctcataaatatgaagccatggatgtggatgacaaa
attactgatccaggaaatccagaaaataaagaagcagattttgagcagcaaaaaatggat
aaggagaattttaaggaagttcagctaataagtgatgaggataagctagcaaaagagact
gcatctggagtgaaatgtaacaatagtgctagtgtgcttgatgatactattccttcaggt
acactaaaagaagtgattgaacccagagaacctgtttccatcaagaatgtacaacgtgat
gaattaagagtagaagatgagaaatcaaaactgaatgtgggggatagtggtccaacggga
gcaacaatgtcgttaaactcttctaaaatgaaatctaaactaggcaaggttggtaaagca
cccccccataagaaaaataggaagactgggaagaaatctcagttggttgctgcaggacct
aatgctgaagtccataccatacccgattataagtcagagaaggaaaatgtaccatgtgat
gttggtgacaaaaccagtgatcttgtcaagcattgtttagataaaactagggtcaaatct
aatacaaggcaaagaaaggccaataaaaaatgttcagagatcagtgccaattcttccatg
gaagttgatgaagttttgagagaagtgaagcctgaacctgtatgttttatcttgagtgga
catcgtcttgaaaggaaggagtttcagaaagtaatcaagcatttgaaaggaagggtttgc
agagattctcatcaatggtcatatcaggctacacatttcatagcccccgatccagtccgt
agaactgagaagttcttttctgctgcagcatctggaaggtggattctcaaatctgattat
ctaacagatagtagtcaggctggaaagctcttgaaggaagagccttatgaatggtacaaa
aatggcctcactgaagacggtgcaatcaatttggaagctcctaggaaatggcggctcttg
agggagaaaactggtcatggtgccttctatggaatgcgtattatcatatatggggaatgt
attgctccacctctggatactctcaagcgagctattaaagctggagatgggacaatacta
gctacatctccaccttatactaaattccttaggtctggagttgattttgctgttattggc
cctggcatgccacgtgctgatacgtgggtccaagagtttttaaacgatgagataccatgt
gtagcggctgattacttggttgagtatgtatgcaaacctggttatcctctggataaacat
gttttgtacaatactcatgcatgggcggaaagatcttttagcaaccttcagagtagagca
gaagaagttgctgaagacgcaagctcacaggatgattgttctgatgaagatatagcctgc
caagagtgcgggtctcgcgatagaggtgaagtgatgctcatttgtggcaatgaagatggt
tcaaatggttgtggaattggtatgcatacagattgctgcaatcctccattactggatatt
ccagagggtgattggttttgttcagattgtattagtagtagaaacagcaactctccaaat
aaaaggaaaaagggagtcttagttaagaggaaatga
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