Benincasa hispida (wax gourd): 120087054
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Entry
120087054 CDS
T07258
Name
(RefSeq) exopolygalacturonase clone GBGE184
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Module
bhj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120087054
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120087054
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120087054
NCBI-ProteinID:
XP_038899827
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Position
9:complement(20401878..20406104)
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AA seq
432 aa
AA seq
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MAIPERFHIATTAVRGLVLGLAWLSCMAWCSSAVAPDYYGDFAGIKGRFLVGAAPATPTP
TAKVFDIRTYGAKADGTTISTQAFMQTWVAACHSGGPAKVVFPAGTFLTGPLVYAGPCDG
PMTVEIQGTVKATTDITEYSSAEWILFESITGLSLIGSGTFDGQGAETWMYNDCRKHSRC
VLPPTSIKFNKVTNGLMEGISSLNSKAFHIFVVLSHNIKVNNLHITAPGNSPNTDGIHIS
QTDVVNITNSIIGTGDDCVSIGHGSTNITVSNVTCGPGHGISVGSLGKYDDEKEVRGIFV
SNCTIRNTTNGLRIKTWAASPAGQATRITFQDIILDSVRNPIIIDQTYGSKKKKAPSQVK
ISDVVFKNIRGTTVSDVGVSLQCSAAVPCDGIKLEEIDLAFTGTRLKHPTFANSCLNAKI
TAIGKQNPPACV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccattccagagagatttcacatcgccaccaccgccgtccgcgggttagtattaggt
ttggcatggctctcttgtatggcctggtgcagctctgctgttgcacctgattattacggt
gactttgctggaattaaaggccgcttcctcgttggagcagcgcctgccacccccaccccc
accgcaaaggttttcgatattagaacctatggtgcgaaggctgatggcaccacaattagt
acacaggcattcatgcagacgtgggttgcagcatgtcactcgggtggcccggcaaaagtg
gttttcccggcggggacgtttttgacggggccgttggtgtacgctgggccgtgtgatggg
ccaatgaccgttgaaattcaagggacagtgaaggcaacgactgatattactgaatattca
tctgcagagtggattctattcgagtctatcactgggttgagtctcattggtagtggaacc
tttgatggacaaggtgcagaaacatggatgtataatgattgtcgcaaacactctcgttgc
gttcttccccccacttcaataaagttcaacaaggtgaccaatggattgatggaggggatt
tcttcattgaacagcaaagccttccacatattcgtggtgttaagccacaatataaaagtc
aacaatctccacataacagctccaggtaacagccccaacactgatggtattcatataagc
caaactgatgttgttaacattacaaatagcattattggcaccggagatgattgtgtttca
attggccatggctccaccaatatcactgtttccaacgtcacatgtggccccggacatggc
atcagtgtgggaagtctaggaaaatatgatgatgagaaggaggtacgtggaatttttgtg
tcaaactgcacaataagaaacaccacaaatggactaaggatcaagacatgggctgcttca
cctgctggccaagctactagaatcactttccaagacattattttagattcagtccgaaac
cctataatcattgatcaaacttatggctcgaagaagaagaaagcaccatctcaagtgaag
attagcgacgtcgtgttcaagaatattcggggcaccacagtgtccgacgtcggtgtttcc
ttgcagtgcagcgctgctgtgccatgcgatggcatcaaattggaagagattgatttggcc
tttactggcactcgcttaaagcacccaacctttgcaaattcatgtttgaatgccaagatt
acggctataggaaaacaaaacccaccagcttgtgtttag
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