Benincasa hispida (wax gourd): 120087108
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Entry
120087108 CDS
T07258
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120087108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120087108
03110 Chaperones and folding catalysts [BR:
bhj03110
]
120087108
03029 Mitochondrial biogenesis [BR:
bhj03029
]
120087108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120087108
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120087108
Messenger RNA biogenesis [BR:
bhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120087108
Chaperones and folding catalysts [BR:
bhj03110
]
Heat shock proteins
HSP60 / Chaperonin
120087108
Mitochondrial biogenesis [BR:
bhj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120087108
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120087108
Exosomal proteins of other body fluids (saliva and urine)
120087108
Exosomal proteins of breast cancer cells
120087108
Exosomal proteins of colorectal cancer cells
120087108
Exosomal proteins of bladder cancer cells
120087108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120087108
NCBI-ProteinID:
XP_038899917
LinkDB
All DBs
Position
9:complement(7800356..7806412)
Genome browser
AA seq
574 aa
AA seq
DB search
MYRLASKLASSLGSSTSRKLVCSRVTSSRSYAAKDINFGVGARAAMLQGVSDVAEAVKVT
MGPKGRNVIIDKSFGSPKVTKDGVTVARSIQFKDKAKNVGADLVKQVASATNTAAGDGTT
CATVLTHAILTEGCKSIAAGVNVMDLRIGIKIAVDAVISELKSRALMISTPEEITQVATI
SANGEREIGELIARAMEKVGREGVITVSDGNTLEDELEVVEGMKLGRGFISPYFINDQKS
QKCELENPLILIHEKKISDMNLLLRVLELAVKNKRALLVVAEDVESDALAMLILNKHHAG
LKVCAIKAPGFGDNRRANLDDLAILTGGEVITDERGLTLDKVQVEMLGTAKKVTVSLDDT
IILHGGGDKKLIEERCEQLRTSIDQSTAMFDKEKAQERLSKLSGGVAVFKVGGVSEIEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLHATKALDELQAQNEDQKRGIEIVQHALRAP
TFTIVSNAGYDGALVLGKLLEQDDRNLGYDAAKGIYVDMVKAGIVDPLKVVRTALVDASS
ISLLLTTAEAAIVEHPDDKEKLPSRMPPMDDMGY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgattagcttccaaattagcttcctcactcggttcctcaacgtcgagaaaactc
gtatgtagcagggtaacaagcagcagaagttatgcggcgaaggatatcaattttggggtt
ggggctcgtgcagctatgcttcaaggtgtctcggatgttgctgaagctgttaaagtgaca
atgggaccaaagggtcgcaatgtaattatcgataaaagttttggcagcccaaaagtcaca
aaggatggtgttactgtagccagaagtatccaattcaaggacaaggctaaaaatgttggg
gcagatctcgtaaagcaagtcgcaagtgccacgaacactgctgctggagacggtacaact
tgtgcaactgttctgactcatgccattctcaccgaaggttgcaagtcaatagctgcaggt
gtaaatgtgatggatttacgcattggtatcaagatagcagttgatgctgttatctctgag
ttgaaaagcagagcattgatgataagcaccccagaagaaattactcaggttgccactatt
tctgcaaatggtgaacgtgagattggagaattgatagcgagggcaatggagaaagttgga
agggaaggagtgattactgtttctgatggaaacactctggaggatgaattggaagtggtg
gaaggaatgaagctaggcagaggctttatttctccttattttattaacgatcaaaagagc
caaaagtgtgaactagaaaaccctctcattctcatacacgaaaagaagatttcagatatg
aatttactcctgcgagtacttgaacttgcagtaaagaataaaagggcacttcttgttgta
gctgaggatgttgagagtgatgcacttgccatgctaatacttaacaagcatcatgctggt
ctgaaggtatgtgccattaaagctcctggttttggggacaatagaagagcaaatttggat
gatcttgccattctgacgggaggagaggtcatcactgatgaacgtggtttaactcttgac
aaagtgcaagtagagatgctcggtactgcaaaaaaggttactgtctccctcgacgataca
atcattcttcatggaggcggtgataagaaactaattgaagaaagatgtgagcagttgagg
acaagtattgaccagagtactgcaatgtttgacaaggaaaaagcccaggaacgattatca
aaactctctggtggtgtagcagtcttcaaggtaggtggggtaagcgagatagaagttggg
gagaggaaagacagagtcacagatgccctgaatgccacaagagcagctgtggaggaagga
attgtgccaggtggtggagttgcccttttgcatgctacgaaggctctggatgaacttcaa
gctcaaaatgaagaccagaaaagaggaatagaaatagtgcaacatgctcttagggcacct
acatttaccatagtctcaaatgctggatatgatggtgctttggttcttgggaaattatta
gaacaggatgatcgtaatttgggttatgatgctgccaaaggtatatatgttgacatggtg
aaggccggaattgtagatcctctgaaagttgtgagaaccgctttagtggatgcttccagc
atctcattgctgttgacaacagccgaggcagctatagtggaacatccagatgataaggaa
aagcttccgagtagaatgccgccaatggatgatatgggctactag
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