Benincasa hispida (wax gourd): 120087159
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Entry
120087159 CDS
T07258
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120087159
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
120087159
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120087159
Prokaryotic type
120087159
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
120087159
NCBI-ProteinID:
XP_038899989
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All DBs
Position
9:4014663..4019758
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AA seq
984 aa
AA seq
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MPLPHLSSLRFLFLSSSPALSPSKFPFFPSLYSPKSPFLFTVLASSSPKRRRSTAAPPSL
DFKRRNSSSLRETKGKEKSVPMEETEATSFGFNKRRAEGRDKSDLPKKNLQLKVRKLNPA
NTISYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSR
VCSETAGGLPGLLLTLAGIGEVGMSVNVWGPSDLKYLVDAMKSFIPNAAMVHTRSFGPAL
SSDVDAVHELSKFCDPIVLVDDEVVKISAILVHPRSNRGFQLFDEDDMGWTQEERRNHDS
EARSSTTKTSSTVKPGDMSVVYVCELPEIKGKFDPSKAAAFGLKPGPKYRELQLGNSVMS
DRQNIMVHPSDVLGPSVPGPVVLLVDCPTESHLSELMALQSLKPYYEDFLSDETETGKVV
TCVIHLSPASILSSPNYQKWVKRLGSAQHIMAGHDRKNVAIPILRSSAKIAARLNHLCPQ
LFPAPGFLSHQQLTIPGSDSCASTEIEVSNHYKSTLAENLLKFTLRPYAQLGLDRSSIPS
QETMSEIINALHSEIPEIVDAVDHVSQLWQGSAETDEKTPVEDNNAMVEEPWLDENKVPS
CLENIRRDDLEIVLLGTGSSQPSKYRNVSSIYINLFSKGSMLLDCGEGTLGQLKRRYGVE
GADAAVRSLRCIWISHIHADHHTGLARILALRRDLLQEVPHEPVLVIGPRQLKRYLDAYQ
RLEDLDMQFLDCKHTTQASLEAFQNVASEIEKLPSESTTSSTYGSSTLIGGAIEQKTASS
LFVKGSRMQSYWKGPSSPVDISVAMPLLKCLNKVLNEAGLEALVSFPVVHCPQAYGVVLK
AAERVNLDGKVIPGWKIIYSGDTRPCPELMEASRGATLLIHEATFEDSLVDEAMAKNHST
TSEAIDIGNSAGAYRIILTHFSQRYPKIPVVDERHMHKTCIAFDLMSVNVADLLVLPKVL
PYLKLLFRNEMMVDESDDIVTMES
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgccattgccgcatctttcaagtctccgcttcctcttcctctcttcttctcctgctcta
tctccttctaaatttcccttctttccttctctatactctcccaaatccccttttctcttc
accgttctcgcctcttcttcaccaaaacgccgtcgtagcaccgccgctcccccctctctc
gatttcaaacggagaaacagtagcagtttgagagagaccaaagggaaagagaagtcggtg
cctatggaggagactgaagctacgtcttttgggtttaacaagaggagggcagagggcaga
gataaaagtgatttgcccaaaaagaatctccagcttaaagttaggaagttgaatcccgcc
aatacgatttcttacgtgcagatactgggaactggaatggacactcaagatacgtcgcct
tcggtcttgcttttcttcgataaacagagattcatttttaatgctggagaggggttgcaa
cgattctgcacggaacataagattaagttatccaagatagatcacatattcctttcccgc
gtatgttcagagactgctggtggacttcctggtttgttgctgactctggctggcattgga
gaagttggaatgtctgtcaatgtctggggtccttctgatttgaagtatttagttgatgca
atgaagtctttcataccaaatgctgccatggttcacacacggagctttggacctgcactt
agttcagacgtggatgctgtccatgaattgagtaagttttgtgatcccattgtccttgtt
gatgatgaggtagtcaagatatcggcaattttggtacatccaaggtcaaatagagggttc
cagctgttcgatgaagatgacatgggctggactcaagaagaaagaagaaaccatgattct
gaagctagaagttcaacaaccaaaacttcatctacagtaaagccaggtgacatgtctgta
gtatatgtatgtgaacttcctgagattaaggggaagtttgatccatcaaaagcagctgca
tttggtcttaaacctgggccaaaatatcgtgagttacaacttggaaattcagtgatgtca
gatcgccaaaatatcatggttcatccaagtgatgtccttggcccctcagttcctggtcca
gttgtgttacttgttgattgtccaacagaatctcatttgtcagagttgatggctttgcaa
tctctgaaaccctattatgaagacttcttgagcgatgagactgaaactggtaaggtggta
acatgtgttattcatcttagtcctgcttctatccttagtagtcccaattaccagaaatgg
gtgaagagattagggtcagcccaacacatcatggctggccatgatagaaagaatgttgca
attccaattctaagatccagcgcaaaaattgctgcaaggcttaatcatttgtgtcctcaa
ttatttccagccccaggcttcttgtcccatcaacagcttactatcccaggatcagattcc
tgtgcctcaactgagatagaagtatcaaatcattacaaaagcacattagctgaaaatctt
ctaaagttcaccttgcgcccctatgcacaacttggattggatcgatctagtattcctagt
caggaaactatgtcagagattatcaatgctctgcattctgagataccagagattgtggat
gctgttgatcacgttagtcagctttggcagggttctgctgaaacagatgagaaaactcct
gttgaagataataatgcaatggttgaagaaccatggctcgatgagaataaagttccaagt
tgtctggaaaatattaggagagatgacttggaaattgttcttcttggtacagggtcgtcc
cagccatccaagtacagaaatgtcagttctatttacattaatcttttctcgaaaggaagt
atgctcttagattgtggcgaaggaaccttgggtcagcttaaaagaagatatggagtagag
ggtgctgatgctgctgtgaggagcctaagatgtatttggatttctcacatccatgcagac
catcacactggactggccagaatacttgctctacggcgtgatttgttgcaggaagtcccc
catgaacctgtactagtaatcgggccaagacaacttaaaagatatttggatgcataccaa
agattagaagatttagatatgcagttccttgattgtaagcacacaacacaagcatcattg
gaagcttttcagaatgttgcttcagaaattgaaaagttgccctcagaaagtaccaccagt
tccacatatggaagcagcacactgataggtggagccatcgaacagaaaaccgcgtctagt
ttattcgtcaaaggatctcgtatgcagagctactggaagggtcctagtagcccagttgat
atcagcgtggccatgccacttcttaaatgcttgaataaagttctgaatgaagctggtctg
gaagctttagttagcttcccagttgtgcactgtccacaggcttatggtgttgtcttaaag
gctgctgaaagggttaatttggatggaaaagtcatacctgggtggaagatcatttactcg
ggtgacactcgaccttgtcccgagctgatggaagcatctcgtggtgcgacacttcttata
catgaggctacttttgaggacagtttggtggatgaggccatggcaaaaaaccacagcaca
acttcagaagctatagacatagggaactccgctggagcatatcgaatcatccttacgcat
ttcagccaaagatacccaaaaattcctgtggtcgatgagagacatatgcacaagacgtgc
attgcatttgacttgatgagtgttaatgtggcagatttgttagtacttcctaaggtcctc
ccctacttgaaactccttttcagaaatgagatgatggtagacgaatctgatgatattgtc
actatggagtcttag
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