Benincasa hispida (wax gourd): 120087581
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Entry
120087581 CDS
T07258
Name
(RefSeq) protein SMG9-like isoform X1
KO
K18735
protein SMG9
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120087581
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120087581
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
RsgA_GTPase
nSTAND3
AAA_18
AAA_16
MeaB
AAA_29
AAA_19
Motif
Other DBs
NCBI-GeneID:
120087581
NCBI-ProteinID:
XP_038900327
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Position
1:22581645..22587038
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AA seq
412 aa
AA seq
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MAGSTGANSSSNPSPAPPPPKILLAKPGLVTGGPINSKIGRGTGADDEAASIRSRLPSLG
SLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPF
PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTISVISGEP
LSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWQLMLTVDLLKHGLPDPSSPISS
HPQNSNIGSEKEYKEKTSSSEDYMATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSF
MGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLVIPNRNKDDSTRGQYESFNLALWKLR
DQVLSMNGASFSRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQSSGMFRR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttcaaccggtgctaattcttcttccaatccttcgcctgctcctcctcccccc
aaaatccttctggcaaagcctggcctcgtaaccggcggaccaattaactctaagattggg
cgcggcaccggcgccgacgacgaagcagcatcgattcggtcccgtctcccttctcttgga
tccctaaatcttctctctgattcctgggatctccacattgaccgtttccttccttttttg
actgagaatacggagttcaaggtggtggggataattggtccaccgggagttggtaagtcg
acgattatgaatgagatttatggctacgacggaagttctccaggtatgttaccaccattt
ccaatactatctgaagatgttagagcaatggctaggcattgtacattgggtattgagccc
cgaatttcttctgagaggatcatacttctggatactcagcctgtgttcagtccttctgtt
ttagctgaaattatgagacccgatggttcatccactatttcagttattagtggtgaacct
ctatctgctgaattggctcatgaacttatgagtatccagctgggcattcttctagcgtcc
atttgcaacattgttcttgtgatatcggagggagttcatgatctaaatatgtggcaattg
atgttaactgttgacttgcttaaacacggcttgcccgatccatcttctcctatttcttct
catccacaaaattctaatataggatccgagaaggaatacaaagaaaaaacttcttcaagt
gaagactatatggcaactccaatctttgttcatgcgaaagtgcaagatcgagatcttgtt
ccacacaatatcttgcaactgaagagagcatttgcctactattttaaaacctcttcattt
atgggagacaaatttgaaaaagtccatagtgagcaactactttcctctgtggttcccgat
accaggaatttagatgtagatggtgaagatcgaagattgcttgtcatccccaaccggaac
aaggatgactctaccagaggtcaatatgaaagctttaacttagctctgtggaagctgagg
gatcaggttctatccatgaatggtgcatcgttttcaagaactgtttcggaacgcgattgg
ttaaaaaactctgtgaagatatgggaatcagtgaagagctctcctatagtaatggagtat
gcaagaacgcttcaatcttcaggtatgttcaggagatag
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