Benincasa hispida (wax gourd): 120087623
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Entry
120087623 CDS
T07258
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120087623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120087623
Enzymes [BR:
bhj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120087623
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120087623
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
PHD_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
120087623
NCBI-ProteinID:
XP_038900382
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All DBs
Position
10:8970985..8975175
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AA seq
351 aa
AA seq
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MLASSFKQRDDCMTTVEFREKGMYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSR
PEFKGITFRKASTGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNC
CPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYA
GGECRVTGDIPYLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQF
CLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKV
RDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWRVSFFQKQKVAGVSDEE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgctggcttctagttttaaacagagagatgattgtatgactaccgtagaattcagagag
aaggggatgtatcagcagcagaagtcaagggaagaacatgctttttctgcagccagcttc
tgcaaagaagtgactgagttgcgccttacatcgatagattctcaagcagcaacttctcgt
ccagagttcaaaggtatcactttcaggaaagcttcaactggtggttttgccaggagtcgt
aatgatgtacacgagttactcgattgtactgtttgcatgaatttaatgcatcctccaatt
taccagtgtgcaaatgggcacactctttgttcaagctgcaaggcaaggattcagaactgt
tgccctacctgccggcatgagcttggaaacataaggtgcctagcactggaaaaggtggcc
gagtcactcgagctcccttgtgtgtaccaaaacctaggttgcattgacatgttcccatac
tacagcaagcttaaacatgagaagaactgtaaataccggccatacaactgcccttacgcc
ggaggtgaatgtcgtgtaactggtgatattccataccttgtcatgcatctcaaggacgat
cacgaggtcgatatgcatgatggatgttccttcagccatagatacgtcaaatccaatcca
caagaagttgaaaatgctacatggatgcttactgtttttaactgctttggacgacaattc
tgtttgcactttgaagcgtttcgattaggaacagcacctgtttacatggcattcctccgg
ttcatgggtgatgatgacgatgcaaaacaattttcttacagtctggaagttggtggaaat
ggaagaaaactcatttggcaaggtattccgagaagtatccgcgatagccatcggaaggtt
cgagacagtcacgatggactaatcattcagaggaaattggcactattctgctctggaaat
gagggaatggaactgaagctaaaggttacaggccgaatatggagagtgagtttttttcag
aagcaaaaagttgcaggtgtgtcagatgaagaataa
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