Benincasa hispida (wax gourd): 120087783
Help
Entry
120087783 CDS
T07258
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120087783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120087783
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120087783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120087783
NCBI-ProteinID:
XP_038900607
LinkDB
All DBs
Position
10:11849541..11853480
Genome browser
AA seq
258 aa
AA seq
DB search
MAKKATPTTTTYSPSPTIQKTRPPIFRTGDVDWVRSDGRGFHQCRPAFFRTGAVNAASGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQGSENKEFSSMLH
KALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSC
FGKNLLIDPTLEEENYQDGSLMITCMPSRYEVTQLTITGEWSTAKINEGMQLCLDASCKL
VEIMRSCLKESAATISEE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaagcgacaccaactaccacaacgtattctccgtctcctactatccagaaa
actaggccacccatcttcagaaccggcgacgtcgactgggttcgctccgatggccgaggc
ttccaccaatgccggcctgctttttttaggactggtgctgtaaatgctgcttcaggatct
gcttatgcagagttcggtaataccaaggtcattgtttctgtatttggccctagagaaagt
aagaaagcaatgatgtacagtgatattggccggctcaattgtagtgtgagttatacaaca
ttttccactccagttcgtggacagggatcagaaaacaaggagttctcctcaatgttacat
aaagctttggaaggggcaataatgttggagacatttcccaagacaaccgtggatgtattt
gccttggtgctggaatctggaggcagtgatcttcctgttgtaatatcatgtgccagcctt
gctcttgccgatgctggaattatgctttatgatcttgttgcctcagtttctgtgagctgc
tttggtaagaatcttcttattgatcctacgttggaagaagaaaactaccaagatggaagt
cttatgataacctgtatgccatctcgttacgaagtcactcagctcacaattacaggcgaa
tggtcaactgctaaaattaatgagggtatgcagctttgccttgatgcttcatgtaagctc
gtggagatcatgcggtcgtgcttgaaggaatctgccgccaccatttctgaggaataa
DBGET
integrated database retrieval system
